Job Description P45955 Confidence 78.50% Date Thu Jan 5 12:03:52 GMT 2012 Rank 122 Aligned Residues 83 % Identity 12% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q	L	N	Y	N	K	G	K	K	D	D	A	A	Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K	A	A	D	A	M
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	D	.	.	.	.	.	.	.	.	.	.	.	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	.	.	.	.	.	.	.	.	F
Template Known Secondary structure																	T	T												T	T				.	.	.	.	.	.	.	.	.	.	.										T															T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.												.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.									.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	V	G	V	I	M	Q	D	K	G	D	T	A	K	A	K	A	V	Y	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions