Job Description P45955 Confidence 93.28% Date Thu Jan 5 12:03:52 GMT 2012 Rank 116 Aligned Residues 89 % Identity 13% Template c3lvhA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:clathrin heavy chain 1; PDBTitle: crystal structure of a clathrin heavy chain and clathrin light chain2 complex Resolution 9.00 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	A	A	I	A	L	V	Q	D	K	S	R	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q	L	N	Y	N	K	G	K	K	D	D	A	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	S	Q	L	A	K	A	Q	L	Q	K	G	M	V	K	E	A	I	D	S	Y	I	K	A	D	D	P	S	S	Y	M	E	V	V	Q	A	A	N	T	S	G	N	W	E	E	L	V	K	Y	L	Q	M	A	R	K	K	A	R	E	S	Y	V	E	T	E	L	I	F	A	L	A	K	T	N	R	L	A	E	L	E
Template Known Secondary structure		S	S	S					T	T	T	S	S	S		T	T	T	T	T	S	S	S		S	S					S							T	T	T	S				T	T															T	T	T	T									T	T			S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1108	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K	A	A	D	A	M	F	K	V	G	V	I	M	Q	D	K	G	D	T	A	K	A	K	A	V	Y	Q	Q	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		E	F	I	N	G	P	N	N	A	H	I	Q	.	.	.	.	.	.	.	.	.	Q	V	G	D	R	C	Y	D	E	K	M	Y	D	A	A	K	L	L	Y	N	N	V
Template Known Secondary structure		S	T	T	T	S		S		S				.	.	.	.	.	.	.	.	.									S			S	T	T	S	S	T	T	G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		1188	.	1190	.	.	.	.	.	.	.	.	.										1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions