Job Description P45955 Confidence 95.59% Date Thu Jan 5 12:03:52 GMT 2012 Rank 112 Aligned Residues 113 % Identity 19% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		S	G	N	A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	Q	.	.	.	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q	L	N	Y	N	K	G	K	K	D	D	A	A	Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K
Query Conservation																							.	.	.
Alig confidence																							.	.	.														.	.	.	.	.																																					.	.
Template Conservation																																							.	.	.	.	.																																					.	.
Template Sequence		A	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	.	.	.	.	.	D	Q	P	R	A	E	L	L	L	G	K	L	Y	Y	E	G	K	W	V	P	A	D	A	K	A	A	E	A	H	F	E	K	A	V	G	R	.	.
Template Known Secondary structure		T	T	T	S	T														T	T	S																T	.	.	.	.	.	T																S	S	S													T	T	T	T	T	.	.
Template Predicted Secondary structure																																							.	.	.	.	.																																					.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		A	A	D	A	M	F	K	V	G	V	I	M	Q	D	.	.	.	.	K	G	D	T	A	K	A	K	A	V	Y	Q	Q	V	I	S	K	Y	P	G	T	D	G	A	K	Q	A	Q	K	R	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																	.	.
Template Conservation																																				.	.
Template Sequence		E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	.	.	N	G	Q	N	S	A	D	F	A	I	A	Q	L
Template Known Secondary structure																T	T	T	S	S																.	.	T	T		T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions