 |
Job Description | P45955 | Confidence | 94.38% | Date | Thu Jan 5 12:03:52 GMT 2012 |
Rank | 115 | Aligned Residues | 43 |
% Identity | 21% | Template | c2w2uA_ |
PDB info |
PDB header:hydrolase/transport | Chain: A: PDB Molecule:hypothetical p60 katanin; |
PDBTitle: structural insight into the interaction between archaeal2 escrt-iii and aaa-atpase
|
Resolution | 2.20 Å |
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | F | K | V | G | V | I | M | Q | D | K | G | D | T | A | K | A | K | A | V | Y | Q | Q | V | . |
. |
. |
. |
. |
. |
. |
I | S | K | Y | P | G | T | D | G | A | K | Q | A | Q | K | R | L | N | A |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
Y | A | I | N | A | V | K | A | D | K | E | G | N | A | E | E | A | I | T | N | Y | K | K | A | I | E | V | L | A | Q | L | V | S | L | Y | R | D | G | S | T | A | A | I | Y | E | Q | M | I | N | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S | S | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|