Job Description P45955 Confidence 99.32% Date Thu Jan 5 12:03:52 GMT 2012 Rank 67 Aligned Residues 125 % Identity 13% Template c2vgxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:chaperone sycd; PDBTitle: structure of the yersinia enterocolitica type iii secretion2 translocator chaperone sycd Resolution 1.95 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	N	A	G	A	P	V	K	S	G	N	A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q	L	N	Y	N	K	G	K	K	D	D	A	A	Y	Y	F	A	S	V	V	K
Query Conservation
Alig confidence																																.	.																		.	.	.
Template Conservation																																.	.																		.	.	.
Template Sequence		G	G	T	I	A	M	L	N	E	I	S	S	D	T	L	E	Q	L	Y	S	L	A	F	N	Q	Y	Q	S	G	Y	.	.	E	D	A	H	V	F	Q	A	L	C	V	L	D	H	Y	D	S	.	.	.	R	F	F	L	G	L	G	A	C	R	Q	A	M	G	Q	Y	D	L	A	I	H	S	Y	S	Y	G	A	V
Template Known Secondary structure				S					T	T																			T			.	.	T	T	T											T	T			.	.	.													T	T
Template Predicted Secondary structure																																.	.																		.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		N	Y	P	K	S	P	K	A	A	D	A	M	F	K	V	G	V	I	M	Q	D	K	G	D	T	A	K	A	K	A	V	Y	Q	Q	V	I	S	K	Y	P	G	T	D	G	.	.	A	K	Q	A	Q	K	R	L	N	A	M
Query Conservation																																														.	.
Alig confidence										.	.	.	.									.																								.	.
Template Conservation										.	.	.	.									.
Template Sequence		M	D	I	E	P	R	F	P	.	.	.	.	F	H	A	A	E	C	L	L	.	Q	G	E	L	A	E	A	E	S	G	L	F	L	A	Q	E	L	I	A	N	P	E	F	E	L	S	T	R	V	S	S	M	L	E	A	I
Template Known Secondary structure						T				.	.	.	.									.
Template Predicted Secondary structure										.	.	.	.									.
Template SS confidence
		99	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions