Job Description P45955 Confidence 99.55% Date Thu Jan 5 12:03:52 GMT 2012 Rank 22 Aligned Residues 116 % Identity 28% Template c2pl2A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:hypothetical conserved protein ttc0263; PDBTitle: crystal structure of ttc0263: a thermophilic tpr protein in thermus2 thermophilus hb27 Resolution 2.50 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q	L	N	Y	N	K	G	K	K	D	D	A	A	Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K	A	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																						.	.	.																																					.	.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		A	E	Q	N	P	L	R	L	G	V	Q	L	Y	A	L	G	R	Y	D	A	A	L	T	L	F	E	R	A	L	K	E	N	P	Q	D	P	.	.	.	E	A	L	Y	W	L	A	R	T	Q	L	K	L	G	L	V	N	P	A	L	E	N	G	K	T	L	V	A	R	T	P	R	Y	L	G	G	Y	M	V	L	S
Template Known Secondary structure																T	T														T	T	S	S	S			.	.	.													T	T																	T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
																																																																								217	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	M	F	K	V	G	V	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	Y	V	A	L	Y	R	Q	A	E	D	R	E	R	G	K	G	Y	L	E	Q	A	L	S	V	L	K	D	A	E	R	V	N	P	R	Y	A	P	L	H	L	Q	R	G	L	V	Y	A	L	L	G	E	R	D	K	A	E	A	S	L	K	Q	A	L	A	L	E	D	T	P	E	I	R	S	A	L	A	E	L
Template Known Secondary structure										T		S	S																							T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	D	K	G	D	T	A	K	A	K	A	V	Y	Q	Q	V	I	S	K	Y	P	G	T	D	G	A	K	Q	A	Q	K	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	S	M	G	R	L	D	E	A	L	A	Q	Y	A	K	A	L	E	Q	A	P	K	D	L	D	L	R	V	R	Y	A	S	A
Template Known Secondary structure						T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions