Job Description P45955 Confidence 99.44% Date Thu Jan 5 12:03:52 GMT 2012 Rank 53 Aligned Residues 145 % Identity 10% Template c1tnoI_ PDB info PDB header:transferase Chain: I: PDB Molecule:geranylgeranyltransferase type i alpha subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a kkksktkcvim peptide derived from k-3 ras4b Resolution 2.70 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	T	S	G	D	Q	S	G	A	A	A	S	T	T	P	T	A	D	A	G	T	A	N	A	G	A	P	V	K	S	G	N	A	N	T	D	Y	N	A	A	I	A	L	V	Q	D	K	S	R	.	Q	D	D	A	M	V	A	F	Q	N	F	I	K	N	Y	P	D	S	T	Y	L	P	N	A	N	Y	W	L	G	Q
Query Conservation																																																			.
Alig confidence																																																			.																				.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		D	V	Y	D	Y	F	R	A	V	L	Q	R	D	E	R	S	E	R	A	F	K	L	T	R	D	A	I	E	L	N	A	A	N	Y	T	V	W	H	F	R	R	V	L	L	R	S	L	Q	K	D	L	Q	E	E	M	N	Y	I	I	A	I	I	E	E	Q	P	K	N	Y	.	.	.	Q	V	W	H	H	R	R	V
Template Known Secondary structure													T	T																		T	T															T	T																		T	T			.	.	.
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Y	N	K	G	K	K	D	D	A	A	Y	Y	F	A	S	V	V	K	N	Y	P	K	S	P	K	A	A	D	A	M	F	K	V	G	V	I	M	Q	D	K	G	D	T	A	K	A	K	A	V	Y	Q	Q	V	I	S	K	Y	P	G	T	D	G	A	K	Q	A	Q	K	R	L
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		L	V	E	W	L	K	D	P	S	Q	E	L	E	F	I	A	D	I	.	.	.	L	N	Q	D	A	K	N	Y	H	A	W	Q	H	R	Q	W	V	I	Q	E	F	R	L	W	D	N	E	L	Q	Y	V	D	Q	L	L	K	E	D	V	R	N	N	S	V	W	N	Q	R	H	F	V
Template Known Secondary structure							T			T	T									.	.	.	T	T	T		T	T															T	T			T	T													T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions