Return to main results Retrieve Phyre Job Id

Job DescriptionP04693
Confidence100.00%DateThu Jan 5 10:58:18 GMT 2012
Rank55Aligned Residues356
% Identity18%Templated2gb3a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL
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Template Sequence  LLTEESPIRKLVPFAEXAKKR. GVRIHHLNIG. . . . . QPDLKTPEVFFERIYENKPE. . . VVYYSHSAGIWELREAFASY
Template Known Secondary structure  S



TTGGGT.T

SS
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S


TT

S...S




TT

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   910.........20......... 30......... 40.........50......... 60.........70.........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  LFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFND
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Template Sequence  YKRRQRVDVKPENVLV. . TNGGSEAILFSFAVI. . ANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFAIPQ. .
Template Known Secondary structure  TS




GGG..S..

TT
S

TT


GGGTS


T..
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   80.........90..... ....100.........110 .........120.........130.........140.........150...
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  LLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVS
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Template Sequence  . . NLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRG. . . . EFASALSIESDKVVVI
Template Known Secondary structure  ..TGGGG

TTSS
TTT




TT

TTTT
B
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GGGS

TT
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   154.....160.........170.........180.........190.........200.........210. ........220.......
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  NSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAM
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Template Sequence  DSVSK. FSACGARVGCLITRNEELISHAXKLA. . . . . . . QGRLAPPLLEQIGSVGLLNL. . . . . . DDSFFDFVRETYRER
Template Known Secondary structure 


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S
GGG


S
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T
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   228.230.. .......240.........250........ .260.........270........ .280.........290...
 
   323......330.........340.........350..... ....360... ......370... ......380
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Query Sequence  RQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS. . . . AAQVDRLR. . . . . EEFGVYLIAS. . . . . . . . . . . . . GRMCVAG
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Template Sequence  VETVLKKLEEHG. . . LKRFTKPSGAFYITAELPVEDAEEFARWXLTDFNXDGETTXVAPLRGFYLTPGLGKKEIRIACV.
Template Known Secondary structure  TT...


B


SBSS
SSS
S

BTT
GGGG
SSTTTTSS

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   295....300...... ...310.........320.........330.........340.........350.........360.........370
 
   381........390.......
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Query Sequence  LNTANVQRVAKAFAAVM
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Template Sequence  LEKDLLSRAIDVLXEGL
Template Known Secondary structure  S
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   371........380.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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