Job Description P04693 Confidence 99.96% Date Thu Jan 5 10:58:18 GMT 2012 Rank 109 Aligned Residues 335 % Identity 12% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	.	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F
Query Conservation																																			.
Alig confidence																			.	.	.	.													.																.	.	.	.	.	.											.
Template Conservation																			.	.	.	.																													.	.	.	.	.	.											.
Template Sequence		I	M	M	G	P	G	P	S	N	C	S	K	R	V	L	T	A	.	.	.	.	M	T	N	T	V	L	S	N	F	H	A	E	L	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	.	.	.	.	.	.	Q	T	E	N	R	A	T	M	C	V	.	S	G	S	A	H	A	G	M	E	A	M	L	S	N
Template Known Secondary structure		B			S	S	S	S											.	.	.	.	T	T	S					T	T																				.	.	.	.	.	.	T				S						.	S	S
Template Predicted Secondary structure																			.	.	.	.																													.	.	.	.	.	.											.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	.	.	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N
Query Conservation																					.	.
Alig confidence			.	.																	.	.																					.	.																			.	.																	.
Template Conservation			.	.																																							.	.																			.	.																	.
Template Sequence		L	.	.	L	E	E	G	D	R	V	L	I	A	V	N	G	I	W	A	E	R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	D	.	.	R	P	F	S	L	E	T	L	A	R	A	I	E	L	H	Q	P	K	.	.	C	L	F	L	T	H	G	D	S	S	S	G	L	L	Q	P	.
Template Known Secondary structure			.	.			T	T								S	S													T	T										T	T	.	.	S																	S	.	.						S			T	T	T	T					.
Template Predicted Secondary structure			.	.																																							.	.																			.	.																	.
Template SS confidence
		89			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	.	.	.	.	.	.	.	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence		.	.																																														.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	E	G	V	G	Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	D	K	W	E	I	D	A	V	Y	T	G	A	Q	V	L	G	A	P	P	G	I	T	P	I	S	I	S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L
Template Known Secondary structure		.	.		T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T															S	S																T		S	S			S		G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		L	L	L	G	N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	Q	I	A	.	.	.	.	.	.	.	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	G	L	D	I	F	V	K	D	P	R	H	R
Template Known Secondary structure								T	T		S	S	S																									.	.	.	.	.	.	.																										T			B	S	S		S	G	G	G	B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		346	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																		.	.	.	.	.	.	.	.									.	.
Query SS confidence													.	.	.	.	.																		.	.	.	.	.	.	.	.									.	.
Query Sequence		R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	.	.	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation													.	.	.	.	.																		.	.	.	.	.	.	.	.									.	.
Alig confidence													.	.	.	.	.																		.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		L	P	T	V	T	G	I	M	I	P	K	G	V	D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	T	F	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F	Y	L	Y	G	F	K	E	S	L
Template Known Secondary structure			T	T								T	T																B			B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions