Job Description P04693 Confidence 99.95% Date Thu Jan 5 10:58:18 GMT 2012 Rank 116 Aligned Residues 322 % Identity 16% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G
Query Conservation
Alig confidence																				.	.														.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																				.	.														.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	.	.	P	E	V	I	D	A	L	H	A	A	L	E	K	.	.	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	.	.	.	.	.	.	.	.	.	P	S	V	E	M	V	R	F	V	N	S	G	T	E
Template Known Secondary structure						S	S	T	T	T	T	T		T	T		B	T		.	.												T	T	.	.		S			S	S																	.	.	.	.	.	.	.	.	.	S	S		S						S	S
Template Predicted Secondary structure																				.	.														.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	.	P	C	C	H	N	P
Query Conservation																																																																											.
Alig confidence																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																						.
Template Conservation																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		A	C	M	A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	G	H	A	.	.	.	.	.	.	.	.	A	T	L	T	A	P	Y	N	.	.	.	.	.	.	.	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A
Template Known Secondary structure															T									T							.	.	.	.	.	.	.	.							T	T	.	.	.	.	.	.	.												S	T	T	T								S	S	B		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	.	.	.	.	.	.	.	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	V	I	G	G	G	L	P	V	G	A	Y	G	G	R	.	.	.	.
Template Known Secondary structure		S		B				T	T												T	T								T	T	T	T	T	T	T		T	.	.	.	.	.	.	.	T							T				S						G	G	G	G	T	T	S									.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q
Query Conservation
Alig confidence		.	.	.	.																																			.	.	.	.	.	.
Template Conservation		.	.	.	.																																			.	.	.	.	.	.
Template Sequence		.	.	.	.	A	E	I	M	K	M	V	A	P	A	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	.	.	.	.	.	.	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M
Template Known Secondary structure		.	.	.	.					T	T	S		T	T																						T	S	T	.	.	.	.	.	.	T																						T	T	T									T	T
Template Predicted Secondary structure		.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
						266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.														.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.						.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.						.
Query Sequence		R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.						.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.						.
Template Conservation
Template Sequence		F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L
Template Known Secondary structure						S	S	S				S	S					T	T	S															T	T					S	S	T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions