Job Description P04693 Confidence 99.97% Date Thu Jan 5 10:58:18 GMT 2012 Rank 92 Aligned Residues 330 % Identity 14% Template d2bwna1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.1

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A
Query Conservation
Alig confidence																															.	.	.																																.	.	.	.	.	.
Template Conservation																															.	.	.																																.	.	.	.	.	.
Template Sequence		I	T	V	W	C	G	N	D	Y	L	G	M	G	Q	H	P	V	V	L	A	A	M	H	E	A	L	E	A	V	.	.	.	G	A	G	S	G	G	T	R	N	I	S	G	T	T	A	Y	H	R	R	L	E	A	E	I	A	G	L	H	Q	K	E	.	.	.	.	.	.	A	A	L	V	F	S	S	A	Y	N	A
Template Known Secondary structure						S		S		T	T	S	G	G	G																.	.	.		S				S	B	T	T	T	B																	T	T		S	.	.	.	.	.	.						S
Template Predicted Secondary structure																															.	.	.																																.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	.	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T
Query Conservation																																																																	.
Alig confidence																																														.	.	.	.	.	.	.													.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		N	D	A	T	L	S	T	L	R	V	L	F	P	G	L	I	I	Y	S	D	S	L	N	H	A	S	M	I	E	G	I	K	R	N	A	G	P	K	R	I	F	R	H	N	.	.	.	.	.	.	.	D	V	A	H	L	R	E	L	I	A	A	D	D	P	A	A	P	K	L	I	A	F	E	S	V	Y	S	M	D
Template Known Secondary structure													S	T	T							T	T												S									T	T	.	.	.	.	.	.	.												S		T	T	S								S	B		T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A
Query Conservation
Alig confidence							.	.	.																																											.	.	.	.	.																				.	.	.
Template Conservation							.	.	.																																											.	.	.	.	.																				.	.	.
Template Sequence		G	D	F	G	P	.	.	.	I	K	E	I	C	D	I	A	E	E	F	G	A	L	T	Y	I	D	E	V	H	A	V	G	M	Y	G	P	R	G	A	G	V	A	E	R	D	G	L	M	H	R	.	.	.	.	.	I	D	I	F	N	G	T	L	A	A	Y	G	V	F	G	G	Y	I	A	.	.	.	A	S	A
Template Known Secondary structure				B			.	.	.												T								T	T	T	T	T	T	S	S	T	T	S								T		G	G	G	.	.	.	.	.		S											S							.	.	.
Template Predicted Secondary structure							.	.	.																																											.	.	.	.	.																				.	.	.
Template SS confidence
		192	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		R	M	V	D	A	V	R	S	Y	A	P	G	F	I	F	S	T	S	L	P	P	A	I	A	A	G	A	Q	A	S	I	A	F	L	K	.	.	.	.	.	.	.	T	A	E	G	Q	K	L	R	D	A	Q	Q	M	H	A	K	V	L	K	M	R	L	K	A	L	G	M	P	.	.	.	.	.	I	I	D	H	G
Template Known Secondary structure																T	S	B																		T	.	.	.	.	.	.	.	S																									T			.	.	.	.	.	B				S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.
		347	.	.	350	.	.	.	.	.						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		G	M	F	S	Y	T	G	L	S	.	.	.	.	.	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V
Query Conservation											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		S	H	I	V	P	V	V	I	G	D	P	V	H	T	K	A	V	S	D	M	L	L	S	D	Y	G	V	Y	V	Q	P	I	N	F	P	T	V	P	R	G	T	E	R	L	R	F	T	P	S	P	V	H	D	L	K	Q	I	D	G	L	V	H	A	M	D	L	L
Template Known Secondary structure		S	S																																T	T	T	S		T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions