Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 81 Aligned Residues 330 % Identity 15% Template d2aeua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SelA-like Resolution 1.70

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R
Query Conservation
Alig confidence																					.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		I	L	E	I	L	N	E	K	G	R	D	A	L	Y	D	L	S	G	L	.	.	.	.	.	S	G	G	F	L	I	D	E	K	D	K	A	L	L	N	T	Y	.	.	.	.	.	.	.	.	.	I	G	S	S	Y	F	A	E	K	V	N	E	Y	G	L	K	H	L	.	.	.	.	.	.	G	G	D	E	N	D
Template Known Secondary structure									T		G	G	G					S	S		.	.	.	.	.															T	S	T	.	.	.	.	.	.	.	.	.	T																		.	.	.	.	.	.	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.																		.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	.	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S
Query Conservation																														.
Alig confidence						.																.	.							.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	C	V	G	.	F	N	R	T	S	S	A	I	L	A	T	I	L	A	L	.	.	K	P	K	K	V	I	H	Y	L	P	E	L	P	G	H	P	S	I	E	R	S	C	K	I	V	N	A	K	Y	F	E	S	.	.	.	.	.	.	.	.	.	.	.	.	D	K	V	G	E	I	L	N	K	I	D	K	D	T
Template Known Secondary structure						.		S	S													.	.			S							S	S	S	S			T									T	T							.	.	.	.	.	.	.	.	.	.	.	.	S							T	T			T	T
Template Predicted Secondary structure						.																.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.													.	130	.	.	.	.	.	.	.	.	.	140	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E
Query Conservation
Alig confidence								.	.																																																					.	.	.	.	.	.	.
Template Conservation								.	.																																																					.	.	.	.	.	.	.
Template Sequence		L	V	I	I	T	G	.	.	S	T	M	D	L	K	V	I	E	L	E	N	F	K	K	V	I	N	T	A	K	N	K	E	A	I	V	F	V	D	D	A	S	G	A	R	V	R	L	L	F	N	Q	P	P	A	L	K	L	G	A	D	.	.	.	.	.	.	.	L	V	V	T	S	T	D	K	L	M	E	G	P
Template Known Secondary structure								.	.	B		T	T	S		B																	T								T	T								T	T								T		S	.	.	.	.	.	.	.						T	T	S	S	S	S	S
Template Predicted Secondary structure								.	.																																																					.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																							.
Template Conservation																						.	.	.	.	.	.	.																							.
Template Sequence		R	G	G	L	L	A	G	K	K	E	L	V	D	K	I	Y	I	E	G	T	.	.	.	.	.	.	.	K	F	G	L	E	A	Q	P	P	L	L	A	G	I	Y	R	A	L	K	N	F	N	.	L	E	R	I	R	K	A	F	E	R	A	K	N	F	D	L	S	K	I	E	K	L	N	K	E	L	K	A	I	D
Template Known Secondary structure		S																				.	.	.	.	.	.	.	T	T	T		B																		.																											T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.																							.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.										.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.
Query Sequence		P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	.	.	T	A	N	V	Q	R	V	A	K	A	F	A
Query Conservation																								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		D	N	I	N	I	V	Y	E	R	T	P	T	G	F	V	I	K	R	V	Y	K	D	D	T	I	N	I	K	K	L	I	E	I	G	F	N	L	L	K	N	Y	G	I	I	T	I	T	V	A	G	M	P	G	A	S	K	S	L	R	I	D	L	T	S	R	D	A	E	R	I	D	D	N	Y	I	I	K	A	I	V
Template Known Secondary structure		T	T									S	S									S	S																								S	T	T	S	S	S		S	S			S					T	T	S	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		395	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		366	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions