Job Description P04693 Confidence 99.87% Date Thu Jan 5 10:58:18 GMT 2012 Rank 191 Aligned Residues 322 % Identity 16% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K
Query Conservation
Alig confidence																.								.	.	.	.	.	.	.														.	.	.	.	.									.	.
Template Conservation																.								.	.	.	.	.	.	.														.	.	.	.	.									.	.
Template Sequence		M	W	E	L	L	Q	R	E	K	D	R	Q	C	R	.	G	L	E	L	I	A	S	.	.	.	.	.	.	.	E	N	F	C	S	R	A	A	L	E	A	L	G	.	.	.	.	.	S	C	L	N	N	K	Y	S	.	.	E	G	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A
Template Known Secondary structure																.	S					T	T	.	.	.	.	.	.	.													T	.	.	.	.	.	S	G	G	G	T				.	.				T														T	T			T	T
Template Predicted Secondary structure																.								.	.	.	.	.	.	.														.	.	.	.	.									.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A
Query Conservation
Alig confidence			.																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A	L	.	.	L	Q	P	H	D	R	I	M	G	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	P	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P
Template Known Secondary structure		T	.								S	S													.	.			S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T		S	B
Template Predicted Secondary structure			.																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.																							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y
Query Conservation
Alig confidence			.	.														.	.	.	.	.																																							.			.	.	.	.	.											.	.
Template Conservation			.	.														.	.	.	.	.																																							.			.	.	.	.	.											.	.
Template Sequence		R	.	.	L	I	I	A	G	T	S	A	Y	A	R	L	I	.	.	.	.	.	D	Y	A	R	M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	K	H	.	A	D	.	.	.	.	.	I	V	T	T	T	T	H	K	T	L	.	.	R
Template Known Secondary structure		S	.	.							S	S			S			.	.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	G	T	.		S	.	.	.	.	.						S	S	G	G	G	.	.
Template Predicted Secondary structure			.	.														.	.	.	.	.																																							.			.	.	.	.	.											.	.
Template SS confidence
		203			.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.						.	.	.	260	.	.	.	.	.	.			.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	.	.	.	.	.	.	.	.	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	A	V	F	P	S	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	M	F	R	E	Y	.	.	.	.	S	L	Q	V	L	K	N	A	R
Template Known Secondary structure		S		S									S						T	T	T																	T	T	T	T			S																		S							.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370														.	.	.	.	.	.	.	.	.						380
Predicted Secondary structure																														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	.	.	.	.	.	.	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	G	R	M	C	V	A	.	.	.	.	.	G
Query Conservation																														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence												.	.	.	.															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		A	M	A	D	A	L	L	E	R	G	.	.	.	.	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K	G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	R	S	A	I	T	P	G	G	L	R	L	G	A	P	A	L	T	S	R	Q
Template Known Secondary structure										T	T	.	.	.	.				G	G	G	S		S	S	S							T	T	T	T													T	T									T	T				S	S	S		S						S						T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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