Job Description P04693 Confidence 99.84% Date Thu Jan 5 10:58:18 GMT 2012 Rank 207 Aligned Residues 352 % Identity 15% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																													.	.	.
Query SS confidence																							.																																													.	.	.
Query Sequence		K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	.	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	.	.	.	M	E	G	L	N	C	Y	R	H	A	I
Query Conservation																							.																																													.	.	.
Alig confidence																							.													.	.	.	.	.									.	.	.																	.	.	.
Template Conservation																																				.	.	.	.	.									.	.	.
Template Sequence		R	L	P	E	V	D	E	L	T	L	V	R	H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	S	C	.	.	.	.	.	T	M	K	Y	N	P	K	L	.	.	.	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L
Template Known Secondary structure																				T	T				T	T	T	S				B	T	T	T	.	.	.	.	.									.	.	.							T	T	S	S			T	T	S		G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.									.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	.	.	.	.	.	.	.	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		G	E	Y	L	K	A	L	T	G	M	.	.	.	.	.	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P
Template Known Secondary structure										T		.	.	.	.	.	S							S	S																			T	T		T	T	T								T	T	S		T									T	T								B		T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I
Query Conservation
Alig confidence			.	.															.	.	.													.							.	.																																.	.	.	.	.	.	.	.
Template Conservation			.	.															.	.	.													.							.	.																																.	.	.	.	.	.	.	.
Template Sequence		E	.	.	G	E	V	D	L	E	A	L	K	R	E	L	G	P	.	.	.	H	V	A	A	L	M	L	T	N	P	N	T	.	L	G	L	F	E	R	.	.	R	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	.	.	S	S	B										S	T	.	.	.	T								S	S		T	.	T	S				T	.	.	T												T							G	G	G	G	G	G	T	T	T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.															.	.	.													.							.	.																																.	.	.	.	.	.	.	.
Template SS confidence
		188			.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																				.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	.	.	.	.	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	T	V	R	R	N	Y	S	S	P	P	N
Query Conservation																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.											.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.
Template Sequence		P	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	.	.	.	.	.	.	.	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F
Template Known Secondary structure						T		S						T	T	T	T	T					T	T	S											.	.	.	.	.	.	.	G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	.	.	L	S	A	A	Q	V	D	R	L	R	E	E	F	G
Query Conservation																																																																		.	.
Alig confidence																.	.	.	.	.																																	.													.	.
Template Conservation																.	.	.	.	.																																	.
Template Sequence		L	A	L	V	R	A	W	A	Y	I	R	T	L	G	.	.	.	.	.	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	.	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G
Template Known Secondary structure																.	.	.	.	.																									T	T		B		S	S		.	S	S			S					B		S	T	T													T	T
Template Predicted Secondary structure																.	.	.	.	.																																	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		368	.	370										.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.									.
Query SS confidence					.	.	.	.	.	.	.	.	.									.
Query Sequence		V	Y	L	.	.	.	.	.	.	.	.	.	I	A	S	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation					.	.	.	.	.	.	.	.	.									.
Alig confidence					.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		F	H	P	P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L
Template Known Secondary structure								S		S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.