Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 30 Aligned Residues 370 % Identity 17% Template d1wsta1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.95

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	.	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P
Query Conservation																																																				.
Alig confidence																					.	.	.											.	.	.																.
Template Conservation																					.	.	.											.	.	.
Template Sequence		E	K	A	M	L	M	K	A	S	E	V	R	E	L	L	K	L	V	E	.	.	.	T	S	D	V	I	S	L	A	G	G	.	.	.	L	P	A	P	E	T	F	P	V	E	T	I	K	K	I	A	V	E	V	L	E	E	H	A	D	K	A	L	Q	Y	G	T	T	K	G	F	T	P	L	R	L	A	L	A	R
Template Known Secondary structure																				T	.	.	.	S	S	S								.	.	.				G	G	G	S																S						S				S	S
Template Predicted Secondary structure																					.	.	.											.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N
Query Conservation
Alig confidence																			.	.																.	.
Template Conservation																			.	.																.	.
Template Sequence		W	M	E	K	R	Y	D	I	P	M	S	K	V	E	I	M	T	.	.	V	A	G	S	Q	Q	A	L	D	L	I	G	R	V	F	.	.	L	N	P	G	D	P	I	V	V	E	A	P	T	Y	L	A	A	I	Q	A	F	K	Y	Y	D	P	E	F	I	S	I	P	L	D	D	K	G	M	R	V	D	L	L	E
Template Known Secondary structure												T	T						.	.		S	S													.	.			T	T								S											T	T											T	T
Template Predicted Secondary structure																			.	.																.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		162	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	L	L	A	T	L	K	T	L	.	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L
Query Conservation											.
Alig confidence											.																																																						.	.
Template Conservation																																																																	.	.
Template Sequence		E	K	L	E	E	L	R	K	Q	G	K	R	V	K	I	V	Y	T	V	S	T	F	Q	N	P	A	G	V	T	M	S	V	D	R	R	K	K	L	L	E	L	A	N	E	Y	D	F	L	I	V	E	D	G	P	Y	S	E	L	R	Y	S	G	E	.	.	P	T	P	P	I	K	H	F	D	D	Y	G	R	V	I
Template Known Secondary structure										T	T											S	S		T	T	T																			T	T								T	T	T	T		B		S	S		.	.					G	G	G	G		S	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L
Query Conservation
Alig confidence												.																								.	.	.	.	.	.	.																					.	.	.	.
Template Conservation												.																								.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		Y	L	G	T	F	S	K	I	L	A	.	P	G	F	R	I	G	W	V	A	A	H	P	H	L	I	R	K	M	E	I	A	K	Q	.	.	.	.	.	.	.	S	I	D	L	C	T	N	T	F	G	Q	A	I	A	W	K	Y	V	E	N	.	.	.	.	G	Y	L	D	E	H	I	P	K	I	I	E	F	Y	K
Template Known Secondary structure						S	T	T	T	T		.	G	G	G																					.	.	.	.	.	.	.				S	S															T	.	.	.	.	T
Template Predicted Secondary structure												.																								.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.													.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	R	M	C	V	A	G	L	N	T	A
Query Conservation																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		P	R	R	D	A	M	L	E	A	L	E	E	Y	M	P	E	G	.	V	E	W	T	K	P	E	G	G	M	F	V	R	V	T	L	P	E	G	I	D	T	K	L	M	M	E	R	A	V	A	K	G	V	A	Y	V	P	G	E	A	F	F	V	H	R	D	K	K	N	T	M	R	L	N	F	T	Y	V	P	E	E
Template Known Secondary structure																	T	T	.							S	B	S	S								T	T			T	T	T	T							T	T						G	G	G	G	S	T	T					S							S	S	S
Template Predicted Secondary structure																			.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	R	E	G	V	R	R	L	A	E	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions