Job Description P04693 Confidence 99.90% Date Thu Jan 5 10:58:18 GMT 2012 Rank 165 Aligned Residues 323 % Identity 11% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	.	.	.	.	.	.	.	.	.	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		V	F	N	F	N	A	G	P	S	A	L	P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	.	.	.	.	.	.	Q	I	P	N	D	Y	Q	I	L	F	L	Q	G	G	A	S
Template Known Secondary structure							S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			.	.	.	.	.	.	T			T	T							S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P
Query Conservation
Alig confidence												.	.																																																					.	.
Template Conservation												.	.																																																					.	.
Template Sequence		L	Q	F	T	M	L	P	M	N	L	.	.	L	T	K	G	T	I	G	N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	L	N	.	.	E	N	D	A	Y	L	H	I	T	S	N	N	T	I
Template Known Secondary structure												.	.			T	T									S												T	T	S									G	G	G	T	S		S				G	G	G					.	.	T	T								S			T	T
Template Predicted Secondary structure												.	.																																																					.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		Y	G	T	Q	Y	Q	.	.	.	.	.	.	.	.	N	F	P	E	I	N	H	A	P	L	I	A	D	M	S	S	D	I	L	S	R	P	L	.	.	.	.	.	.	.	.	.	.	.	K	V	N	Q	F	G	M	I	Y	A	G	A	Q	K	N	L	G	P	S	G	V	.	.	T	V	V	I	V	K	K	D	L
Template Known Secondary structure		T	T				S	.	.	.	.	.	.	.	.	S						S	S							T	T	T	T	T	S	S			.	.	.	.	.	.	.	.	.	.	.		G	G	G		S						T	T	T	T	T	S		T	T		.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		154	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.
		266	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		A	E	A	A	G	R	V	L	.	.	.	.	.	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																												.	.	.	.																															.	.	.
Template Conservation																																										.	.	.	.																															.	.	.
Template Sequence		L	N	T	K	V	E	Q	V	P	T	M	L	Q	Y	A	T	H	I	K	S	D	S	L	Y	N	T	P	P	T	F	S	I	Y	M	L	R	N	V	L	D	.	.	.	.	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	.	.	.	G	F	Y
Template Known Secondary structure				S			T	T			G	G	G								T	T	T		S	S																.	.	.	.					T	T																						T	T	T	.	.	.	T	S	S
Template Predicted Secondary structure																																										.	.	.	.																															.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.									.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Query SS confidence																.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Query Sequence		Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A
Query Conservation																.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Alig confidence																.	.	.	.	.	.	.	.																				.	.	.	.	.	.						.
Template Conservation
Template Sequence		V	G	H	A	E	K	G	S	R	S	L	M	N	V	T	F	N	L	R	N	E	E	L	N	Q	Q	F	L	A	K	A	K	E	Q	G	F	V	G	L	N	G	H	R	S	V	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q
Template Known Secondary structure				S	S		G	G	G	B		S	S							S	S														T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions