Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 24 Aligned Residues 371 % Identity 17% Template d1vp4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.82

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	.	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P
Query Conservation																																																										.
Alig confidence																.	.	.																.	.	.																						.
Template Conservation																.	.	.																.	.	.
Template Sequence		K	I	G	Q	N	X	K	S	S	I	I	R	E	I	.	.	.	L	K	F	A	A	D	K	D	A	I	S	F	G	G	G	.	.	.	V	P	D	P	E	T	F	P	R	K	E	L	A	E	I	A	K	E	I	I	E	K	E	Y	H	Y	T	L	Q	Y	S	T	T	E	G	D	P	V	L	K	Q	Q	I	L	K
Template Known Secondary structure						T										.	.	.	T	T	T	T	T	S	T	T								.	.	.	S			G	G	G	S																S					T	S				T	T
Template Predicted Secondary structure																.	.	.																.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	L	F	G	A	D	H	P	V	.	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F
Query Conservation											.
Alig confidence											.									.	.																.	.
Template Conservation																				.	.																.	.
Template Sequence		L	L	E	R	X	Y	G	I	T	G	L	D	E	D	N	L	I	F	.	.	T	V	G	S	Q	Q	A	L	D	L	I	G	K	L	F	.	.	L	D	D	E	S	Y	C	V	L	D	D	P	A	Y	L	G	A	I	N	A	F	R	Q	Y	L	A	N	F	V	V	V	P	L	E	D	D	G	X	D	L	N	V	L
Template Known Secondary structure											S			G	G	G				.	.																.	.			T	T								S											T	T	T										T	T
Template Predicted Secondary structure																				.	.																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		N	D	L	L	A	T	L	K	T	L	.	.	.	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L
Query Conservation												.	.	.
Alig confidence												.	.	.																																																						.	.
Template Conservation																																																																				.	.
Template Sequence		E	R	K	L	S	E	F	D	K	N	G	K	I	K	Q	V	K	F	I	Y	V	V	S	N	F	H	N	P	A	G	V	T	T	S	L	E	K	R	K	A	L	V	E	I	A	E	K	Y	D	L	F	I	V	E	D	D	P	Y	G	A	L	R	Y	E	G	E	.	.	T	V	D	P	I	F	K	I	G	G	P	E
Template Known Secondary structure											T	T		G	G	G									S	S		T	T	T																			T	T								S	S	T	T		B		S	S		.	.											T	T
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T
Query Conservation
Alig confidence															.																								.	.	.	.	.	.	.																					.	.	.	.
Template Conservation															.																								.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		R	V	V	L	L	N	T	F	S	K	V	L	A	.	P	G	L	R	I	G	X	V	A	G	S	K	E	F	I	R	K	I	V	Q	A	K	Q	.	.	.	.	.	.	.	S	A	D	L	C	S	P	A	I	T	H	R	L	A	A	R	Y	L	E	R	.	.	.	.	Y	D	L	L	E	Q	L	K	P	T	I	E
Template Known Secondary structure		T							S	T	T	T	T		.	G	G	G																					.	.	.	.	.	.	.				S	S																.	.	.	.	S						T
Template Predicted Secondary structure															.																								.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.								.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.													.	.	.	.	.	.	380
Predicted Secondary structure																						.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	.	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G
Query Conservation																						.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	R	R	K	R	T	V	X	L	N	A	L	E	E	Y	F	S	D	I	P	G	V	K	W	V	K	S	E	G	G	L	F	I	W	L	T	L	P	E	G	F	D	T	W	E	X	F	E	Y	A	K	R	K	K	V	F	Y	V	P	G	R	V	F	K	V	Y	D	E	P	S	P	S	X	R	L	S	F	C	L
Template Known Secondary structure																		S	T	T	S	T	T							S	B	S	S								T	T			T	T	T	T								T						G	G	G	G		T	T					S							S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	D	E	K	I	V	E	G	I	K	R	L	R	E	V	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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