Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 60 Aligned Residues 352 % Identity 22% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L
Query Conservation
Alig confidence																					.	.											.	.	.	.	.																					.	.	.
Template Conservation																					.	.											.	.	.	.	.																					.	.	.
Template Sequence		R	L	H	P	R	T	E	A	A	I	F	P	R	M	S	G	L	A	Q	.	.	R	L	G	A	V	N	L	G	Q	G	.	.	.	.	.	F	P	S	N	P	P	P	P	F	L	L	E	A	V	R	R	A	L	G	R	.	.	.	Q	D	Q	Y	A	P	P	A	G	L	P	A	L	R	E	A	L	A	E	E	F
Template Known Secondary structure					G	G	G	G	G												.	.			T								.	.	.	.	.	S		S	S														T	T	T	.	.	.	S		S				T	T
Template Predicted Secondary structure																					.	.											.	.	.	.	.																					.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.										.	.																.	.
Template Conservation		.	.	.	.	.	.										.	.																.	.
Template Sequence		.	.	.	.	.	.	A	V	E	P	E	S	V	V	V	.	.	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	.	.	V	G	P	G	D	E	V	V	V	L	E	P	F	F	D	V	Y	L	P	D	A	F	L	A	G	A	K	A	R	L	V	R	L	D	L	T	P	E	G	F	R	L	D	L	S	A
Template Known Secondary structure		.	.	.	.	.	.	T	S		G	G	G				.	.		S	S													.	.			T	T								S			T	T								T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.										.	.																.	.
Template SS confidence
								75	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N
Query Conservation
Alig confidence								.	.																																																											.	.	.	.
Template Conservation								.	.																																																											.	.	.	.
Template Sequence		L	E	K	A	L	T	.	.	P	R	T	R	A	L	L	L	N	T	P	M	N	P	T	G	L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D	E	V	Y	D	E	L	Y	Y	G	E	R	P	R	R	L	R	E	.	.	.	.	F	A	P	E	R	T	F	T	V	G
Template Known Secondary structure				T	T			.	.	T	T								S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S								.	.	.	.			T	T	T
Template Predicted Secondary structure								.	.																																																											.	.	.	.
Template SS confidence
		145	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		S	A	G	K	R	L	E	A	T	G	Y	R	V	G	W	I	V	G	P	K	E	F	M	P	R	L	A	G	M	R	Q	.	.	.	.	.	.	.	W	T	S	F	S	A	P	T	P	L	Q	A	G	V	A	E	A	L	K	.	.	.	.	L	A	R	R	E	G	F	Y	E	A	L	R	E	G	Y	R	R	R	R
Template Known Secondary structure							T	T		G	G	G									T	T	T										.	.	.	.	.	.	.			T	S	S															.	.	.	.					T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.													.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A	N	V	Q	R	V	A	K
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation													.	.	.	.																																																						.
Template Sequence		D	L	L	A	G	G	L	R	A	M	G	.	.	.	.	L	R	V	Y	V	P	E	G	T	Y	F	L	M	A	E	L	P	G	W	D	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	L	E	D	P	P	K	D	L	F	R	F	A	F	C	.	K	T	E	E	E	L	H	L	A	L	E
Template Known Secondary structure											T	T	.	.	.	.							S	B	S	S							T	T										T							G	G	G	G		S	S	S			T	T								.	S
Template Predicted Secondary structure													.	.	.	.																																																						.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
		392	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	G	R	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions