Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 82 Aligned Residues 361 % Identity 13% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	.	.	.	.	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A
Query Conservation																																		.	.	.	.
Alig confidence																									.									.	.	.	.																					.	.	.	.	.	.
Template Conservation																									.																																	.	.	.	.	.	.
Template Sequence		K	S	V	E	T	V	S	M	I	P	R	D	E	R	L	K	K	M	Q	E	A	G	Y	.	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	.	.	.	.	.	.	M	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	R	T
Template Known Secondary structure																						T	T	T	.		G	G	G	S		G	G	G		S				S		S	S	S													T	.	.	.	.	.	.	T					S	S	S
Template Predicted Secondary structure																									.																																	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																			.	.																																					.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																			.	.																																					.	.
Template Sequence		V	Q	E	L	F	G	F	K	H	.	.	.	.	.	.	.	.	.	.	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.	.	I	K	P	G	Q	Y	V	A	G	N	M	Y	K	N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	K	.	.	G	D	I
Template Known Secondary structure									S		.	.	.	.	.	.	.	.	.	.					S	S													.	.			T	T						S					S	S						B		T	T	S	S		S	S				T	T	T	.	.	T		B
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																			.	.																																					.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																	.	.																																																.	.	.	.	.	.
Query SS confidence																	.	.																																																.	.	.	.	.	.
Query Sequence		R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	.	.	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	.	.	.	.	.	.	G	M	E	E	D	A	Y	A	I	R
Query Conservation																	.	.																																																.	.	.	.	.	.
Alig confidence																	.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	K	K	L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A
Template Known Secondary structure															G	G	G								S	S	B		S	T	T		B																	T	T								T	T												S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A
Query Conservation
Alig confidence																																																				.																				.	.	.	.	.	.	.	.
Template Conservation																																																				.																				.	.	.	.	.	.	.	.
Template Sequence		E	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	D	E	M	F	S	S	A	K	E	L	V	V	V	Y	E	G	M	.	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	.	.	.	.	.	.	.	.	E	A
Template Known Secondary structure										T	S	S						T	T	T	T	T			S	S																								S	S	.			S	S	S															.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																																				.																				.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.														.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence																												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	K	A	A	G	V	P	.	.	.	.	I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	I	K	L
Template Known Secondary structure		T																					T	T	T			.	.	.	.	B		S	S			S	S										T	T	T	S		G	G	G															S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.					.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
				374	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.								.	.
Query SS confidence		.	.								.	.
Query Sequence		.	.	G	R	M	C	V	A	G	.	.	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation		.	.								.	.
Alig confidence		.	.								.	.
Template Conservation
Template Sequence		E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions