Job Description P04693 Confidence 99.91% Date Thu Jan 5 10:58:18 GMT 2012 Rank 154 Aligned Residues 333 % Identity 12% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	.	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D
Query Conservation																															.
Alig confidence																															.																												.								.	.
Template Conservation																																																											.								.	.
Template Sequence		V	Y	L	D	N	A	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	.	S	P	R	E	I	V	Y	.	.	T	R	N	A	T	E	A	I	N	L	V	A	Y
Template Known Secondary structure					B	T	T	T																			T							S																					T	T		S	.		G	G	G				.	.		S	S
Template Predicted Secondary structure																																																											.								.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
		114	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																									.	.	.	.
Query SS confidence						.	.																									.	.	.	.
Query Sequence		F	L	K	R	.	.	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	.	.	.	.	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G
Query Conservation						.	.																									.	.	.	.
Alig confidence						.	.																									.	.	.	.													.	.															.	.	.
Template Conservation																																																.	.															.	.	.
Template Sequence		S	W	G	M	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	D	E	Q	.	.	E	S	F	D	L	E	H	F	K	T	L	L	S	E	.	.	.	K	T	K	L	V	T	V	V	H	I	S	N	T	L	G
Template Known Secondary structure			T							T	T							T	T			G	G	G	T																			B		T	T	.	.	S	S	B											T	.	.	.	T								S	B		T	T	T
Template Predicted Secondary structure																																																.	.															.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E
Query Conservation
Alig confidence						.	.	.																															.	.	.	.	.	.	.	.	.																					.	.
Template Conservation						.	.	.																															.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		C	V	N	P	.	.	.	A	E	E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	Y	P	L	D	V	.	.	.	.	.	.	.	.	.	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A	P	T	G	.	.	I	G	F	L	Y	G	K	E	E	I	L	E
Template Known Secondary structure		B	B			.	.	.											T	T								T	T	T	T	T	T	S					.	.	.	.	.	.	.	.	.				T		S						G	G	G	T	T	S		T	T	.	.
Template Predicted Secondary structure						.	.	.																															.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		184	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.															.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	G	R	V	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		A	M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	.	.	.	.	.	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H	Y	L	W	Q	G	L	G	Q	I
Template Known Secondary structure			S				S		S	T	T	S						S	S							T	T	G	G	G			S	S																		.	.	.	.	.																								T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.				.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.																	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		M	P	E	R	N	F	D	Y	L	L	N	Q	R	.	.	.	.	.	G	M	F	S	Y	T	.	.	.	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R
Query Conservation															.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence			.	.	.										.	.	.	.	.							.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation			.	.	.
Template Sequence		P	.	.	.	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	V	A	G	L	H	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A	R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L
Template Known Secondary structure		T	.	.	.	T					S			G	G	G	S		B		S							T	T	B											T	T	T				B		S		T	T								T	T											T	T
Template Predicted Secondary structure			.	.	.
Template SS confidence
		325				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		389	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	Q	S	L	Q	A	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions