Job Description P04693 Confidence 99.95% Date Thu Jan 5 10:58:18 GMT 2012 Rank 121 Aligned Residues 335 % Identity 12% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	.	.	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D
Query Conservation																														.	.
Alig confidence																														.	.																											.	.								.	.
Template Conservation																																																										.	.								.	.
Template Sequence		Y	L	D	G	N	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	.	.	R	D	G	E	V	V	V	.	.	T	D	T	T	S	I	N	L	F	K	V	L	S
Template Known Secondary structure					T	T	T	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T		.	.		T	T	S				.	.		S
Template Predicted Secondary structure																																																										.	.								.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
		114	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		F	L	K	.	.	.	.	.	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																																						.	.	.												.	.	.
Template Conservation																																															.	.	.												.	.	.
Template Sequence		A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	.	.	.	V	D	S	P	E	E	L	P	Q	A	I	.	.	.	D	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y
Template Known Secondary structure											S	T	T								T	T	S																	S	S						.	.	.		S	S	G	G	G						.	.	.	S	T	T								S	B		T	T	T		B
Template Predicted Secondary structure																																															.	.	.												.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A
Query Conservation
Alig confidence					.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		M	H	D	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	L	.	.	.	.	.	.	.	.	.	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L	C	D	L
Template Known Secondary structure		B			.	.	.												T								T	T	T	T	T	T	S					.	.	.	.	.	.	.	.	.				T		S						S	S	S	T	T				T	T									T	T	T	T	T	T
Template Predicted Secondary structure					.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.																	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	R	V	L	G	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	.	.	.	.	.	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q
Template Known Secondary structure		S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.						.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.		.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																											.	.	.			.									.	.
Query SS confidence															.	.	.	.	.																											.	.	.			.									.	.
Query Sequence		E	M	P	E	R	N	F	D	Y	L	L	N	Q	.	.	.	.	.	R	G	M	F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	.	.	.	A	S	.	G	R	M	C	V	A	G	L	.	.	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation															.	.	.	.	.																											.	.	.			.									.	.
Alig confidence															.	.	.	.	.																											.	.	.			.									.	.
Template Conservation
Template Sequence		R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T	E	V	W	D	A	V	Q	I	L	G	E	I	L
Template Known Secondary structure				T	T	S						S		S	S	G	G	G	B		S							T	T										T	T	T							T	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions