Job Description P04693 Confidence 99.88% Date Thu Jan 5 10:58:18 GMT 2012 Rank 188 Aligned Residues 273 % Identity 14% Template d1qgna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.90

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	.	.	.	.	A	G	A	G	F	E	V	S	T	Y	P
Query Conservation																																																																			.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		V	L	E	E	K	I	S	A	L	E	G	A	.	.	.	.	.	.	.	.	.	.	E	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	.	.	V	P	A	G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D
Template Known Secondary structure												T		.	.	.	.	.	.	.	.	.	.	S						S														.	.	S		S	S							T	T	S											T	G	G	G	G	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.											130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.												.	.																					.	.	.																													.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.												.	.																					.	.	.																													.	.	.	.	.	.	.
Template Sequence		P	A	.	.	.	.	.	.	.	D	V	G	A	L	E	L	A	L	N	Q	.	.	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	.	.	.	I	E	L	V	S	K	L	C	H	E	K	G	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	.	.	.	.	.	.	.												.	.	S									S	S		T	T	T						.	.	.											T	T								T	T	T		T	T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.												.	.																					.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		186	.								.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L
Query Conservation
Alig confidence		.	.	.																																.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	A	L	A	L	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	.	.	.	.	.	.	L	K	L	V	S	E	I	R	N	L	H	H	I	L	G	G	A	L	N	P	N	A	A	Y	L	I	I	R	G	M	K	T	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	T	T	T	T	T		S						T	T	T	T	T	T		S	S	S										.	.	.	.	.	.																														G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
					247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.																.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																					.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																					.	.
Query Sequence		A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	Q	R	G	M	F	S	Y	.	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																					.	.
Alig confidence		.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																					.	.
Template Conservation		.	.
Template Sequence		.	.	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	D	L	L	T	T	A	K	F	V	D	A	L	K	I	P	Y	I	A	P
Template Known Secondary structure		.	.																					T		T	T							T	T	S	S	S	S	T	T									S				S							S	S													S	S	S				S
Template Predicted Secondary structure		.	.
Template SS confidence
				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
																																		372	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	G	V	E	D	F	D	D	L	K	A	D	I	L	Q	A	L	D	S	I
Template Known Secondary structure					S	S	S											S	T	T	S							T	T	T			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions