Job Description P04693 Confidence 99.92% Date Thu Jan 5 10:58:18 GMT 2012 Rank 150 Aligned Residues 297 % Identity 13% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

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		65	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		L	Y	L	P	M	E	G	.	.	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G
Query Conservation									.	.
Alig confidence									.	.																	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																											.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		N	Y	I	A	P	L	G	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	K	S	E	N	.	.	.	.	.	.	.	.	.	.	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	G	.	V	K	Q	D	D	I	V	L	A	S	S	F	T	F	I	A	S	V	A	P	I	C	Y	L	K
Template Known Secondary structure		T	T	T	S		T	T																	S		.	.	.	.	.	.	.	.	.	.					S													T	T	.			T	T							S	S	S		G	G	G	T						T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M
Query Conservation
Alig confidence													.	.																										.	.	.									.	.	.
Template Conservation													.	.																										.	.	.									.	.	.
Template Sequence		A	K	P	V	F	I	D	C	D	E	T	.	.	Y	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	T	.	.	.	H	L	Y	G	N	A	A	K	.	.	.	M	D	E	I	V	E	I	C	K	E	N	D	I	V	L	I	E	D	A	A	E	A	L	G	S	F	Y	K
Template Known Secondary structure									B		T	T	.	.	S	S	B													S	S									.	.	.		G	G	G					.	.	.											T	T								T	T		T	T				T
Template Predicted Secondary structure													.	.																										.	.	.									.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	.	.	.	.	.	.	.	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																		.																															.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																		.
Template Sequence		N	K	A	L	G	.	.	.	.	.	.	T	F	G	E	F	G	V	Y	S	Y	N	G	N	K	I	I	T	.	T	S	G	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H	L	D	Y	G	Y	N	Y	R	L	S	N	V	L	G	A	I	G
Template Known Secondary structure		T			T	T	.	.	.	.	.	.	S	S	S	S								T	T	S	S	S		.		S	S							S												T	B	T				S	S	S	S				S	S				B		B
Template Predicted Secondary structure							.	.	.	.	.	.																		.
Template SS confidence
		166	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	Q	M	E	V	.	.	.	.	.	.	.	.	.	.	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W	Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K	N	E	L	N	A	C	Q	K	D	I	N	I	S	Q	K	N	I
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.	.	.																				T	T	T								T	T						S	S						S			G	G	G	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.																													.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		T	L	H	P	K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q	E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	F	F	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D	D	V	Y	E	I	S	K	L	I	L	K	S	I
Template Known Secondary structure																	T	T				B						G	G	G		G	G	G	T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions