Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 74 Aligned Residues 335 % Identity 18% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L
Query Conservation
Alig confidence															.										.	.	.	.	.																					.	.	.								.														.	.	.	.	.	.
Template Conservation															.										.	.	.	.	.																					.	.	.								.														.	.	.	.	.	.
Template Sequence		N	I	R	E	P	A	T	V	L	G	I	S	P	.	D	Q	L	L	D	F	S	A	N	.	.	.	.	.	I	N	P	L	G	M	P	V	S	V	K	R	A	L	I	D	N	L	D	C	.	.	.	I	E	R	Y	P	D	A	.	D	Y	F	H	L	H	Q	A	L	A	R	H	H	.	.	.	.	.	.	Q	V
Template Known Secondary structure											T	S		G	.	G	G	S				S	S		.	.	.	.	.			T	T													T	G	G	G	.	.	.	G	G	S				T	.	T													.	.	.	.	.	.	T	S
Template Predicted Secondary structure															.										.	.	.	.	.																					.	.	.								.														.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.							.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P
Query Conservation
Alig confidence									.	.																.	.	.	.																																															.	.	.	.
Template Conservation									.	.																.	.	.	.																																															.	.	.	.
Template Sequence		P	A	S	W	I	L	A	.	.	G	N	G	E	T	E	S	I	F	T	V	A	S	G	L	.	.	.	.	K	P	R	R	A	M	I	V	T	P	G	F	A	E	Y	G	R	A	L	A	Q	S	G	C	E	I	R	R	W	S	L	R	E	A	D	G	W	Q	L	T	D	A	I	L	E	A	.	.	.	.	L	T
Template Known Secondary structure			G	G	G				.	.		S	S													.	.	.	.			S							S			T									T	T										G	G	G	T	T				T	T					.	.	.	.
Template Predicted Secondary structure									.	.																.	.	.	.																																															.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L
Query Conservation
Alig confidence																																																					.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		P	D	L	D	C	L	F	L	C	T	P	N	N	P	T	G	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A	F	I	D	F	I	P	H	E	.	.	.	.	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L	R	S	L	T	K	F	Y	A	I
Template Known Secondary structure		T	T								S	S		T	T	T																				T								T	T	G	G	G	S	T	T		.	.	.	.			S	G	G	G		T	T		T	T							S	T	T	T	T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		P	G	L	R	L	G	Y	L	V	N	S	D	D	A	A	M	A	R	M	R	R	Q	.	.	.	.	.	.	.	.	Q	M	P	W	S	V	N	A	L	A	A	L	A	G	E	V	A	L	Q	D	.	.	.	.	.	.	.	S	A	W	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F	Y	Q	A	L	C
Template Known Secondary structure		T	T	T																				.	.	.	.	.	.	.	.	S		T	T		S											G	G	G		.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.											.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation																									.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																	.	.																				.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation					.	.	.	.																																																						.	.
Template Sequence		Q	L	P	.	.	.	.	L	L	T	V	Y	P	G	R	A	N	Y	L	L	L	R	C	E	R	E	D	I	D	L	Q	R	R	L	L	T	Q	R	I	L	I	R	S	C	A	N	Y	P	G	L	D	S	R	Y	Y	R	V	A	I	R	.	.	S	A	A	Q	N	E	R	L	L	A	A	L	R	N	V	L
Template Known Secondary structure		T	S	T	.	.	.	.	T							S	S	S							S		T	T									T	T	T							T	T	S	T	T			T	T								.	.
Template Predicted Secondary structure					.	.	.	.																																																						.	.
Template SS confidence
		286	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions