Job Description P04693 Confidence 99.90% Date Thu Jan 5 10:58:18 GMT 2012 Rank 170 Aligned Residues 369 % Identity 11% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		P	D	T	F	E	D	I	L	Q	D	V	E	K	I	I	M	P	G	V	T	H	W	H	S	P	Y	F	F	A	Y	F	P	T	A	S	S	Y	P	A	M	L	A	D	M	L	C	G	A	I	G	C	I	.	G	F	S	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	Q	L
Template Known Secondary structure															T	T	G	G	G				T	T	S	T	T	B		S	S	S																						.		S	S	G	G	G																			T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	.	.	.	.	.	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T
Query Conservation				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	F	L	A	G	E	A	G	E	G	G	G	V	I	Q	G	S	A	S	E	A	T	L	V	A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A	A	S	P	G	L	T	Q	G	A	V	L	E	K	L	V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	L	K	A
Template Known Secondary structure			G	G	G			T	T	T		S							S																									S	T	T																T	T													T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	.	.	.	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E
Query Conservation																										.	.	.
Alig confidence								.	.																	.	.	.																					.	.	.
Template Conservation								.	.																																								.	.	.
Template Sequence		I	P	S	D	G	K	.	.	F	A	M	R	A	S	A	L	Q	E	A	L	E	R	D	K	A	A	G	L	I	P	F	F	V	V	A	T	L	G	T	T	S	C	C	S	F	D	N	.	.	.	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E
Template Known Secondary structure						T	T	.	.	S																	T	T										B	S		T	T	T			B			.	.	.											T	T								T	T	G	G	G	G	G	G	S	T	T
Template Predicted Secondary structure								.	.																																								.	.	.
Template SS confidence
		209	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L
Query Conservation
Alig confidence														.	.	.												.																																																					.
Template Conservation														.	.	.												.																																																					.
Template Sequence		F	R	H	L	L	N	G	V	E	F	A	D	.	.	.	S	F	N	F	N	P	H	K	W	L	L	.	V	N	F	D	C	S	A	M	W	V	K	R	R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	.
Template Known Secondary structure		T	G	G	G	G	T	T	G	G	G		S	.	.	.										S	S	.			S	S							S							G	G	G				S				G	G	G	S	S	S		S					T													.
Template Predicted Secondary structure														.	.	.												.																																																					.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																								.														.	.	.	.	.																			.	.	.	.	.
Query SS confidence																																								.														.	.	.	.	.																			.	.	.	.	.
Query Sequence		K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	.	L	N	Q	R	G	M	F	S	Y	T	G	L	S	.	.	.	.	.	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.
Query Conservation																																								.														.	.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.	.																											.	.	.						.														.	.	.	.	.																			.	.	.	.	.
Template Conservation		.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	V	K	G	L	Q	A	Y	I	R	K	H	V	Q	L	S	H	E	F	E	A	F	V	L	Q	D	P	.	.	.	R	F	E	V	C	A	E	V	T	L	G	L	V	C	F	R	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	L	V	P	C	R	L	R	G	Q
Template Known Secondary structure		.	.	.	.																										T	.	.	.	T					S				S	S							S	S																T	S		B							T	T
Template Predicted Secondary structure		.	.	.	.																											.	.	.
Template SS confidence
						371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
				374	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure		.	.							.	.
Query SS confidence		.	.							.	.
Query Sequence		.	.	G	R	M	C	V	A	.	.	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V
Query Conservation		.	.							.	.
Alig confidence		.	.							.	.
Template Conservation
Template Sequence		F	V	L	R	F	A	I	C	S	R	K	V	E	S	G	H	V	R	L	A	W	E	H	I	R	G	L
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions