Job Description P04693 Confidence 99.96% Date Thu Jan 5 10:58:18 GMT 2012 Rank 102 Aligned Residues 351 % Identity 16% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	.	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L
Query Conservation																																																																		.
Alig confidence												.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.												.
Template Conservation												.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.
Template Sequence		K	L	L	V	T	P	P	K	A	L	.	.	.	.	.	.	L	K	P	L	S	I	P	N	Q	L	L	L	G	P	G	.	.	.	.	.	.	.	P	S	N	L	P	P	R	I	M	A	A	.	.	.	.	G	G	L	Q	M	I	G	S	M	S	K	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q	Y	V
Template Known Secondary structure				S	S				G	G	G	.	.	.	.	.	.	G	S											S	S	S	.	.	.	.	.	.	.												.	.	.	.		T						T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D
Query Conservation
Alig confidence			.	.	.	.	.	.	.																										.	.																																					.	.
Template Conservation			.	.	.	.	.	.	.																										.	.																																					.	.
Template Sequence		F	.	.	.	.	.	.	.	Q	T	R	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	N	V	.	.	L	E	P	G	D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	.	.	G	H	Y	T	L	Q	E
Template Known Secondary structure			.	.	.	.	.	.	.	T				S						S	S														.	.			S	S							B	S	S																B			B			T	T	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.																										.	.																																					.	.
Template SS confidence
		68								.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence													.	.																	.	.	.																																													.	.	.	.
Template Conservation													.	.																	.	.	.
Template Sequence		V	E	E	G	L	A	Q	H	K	P	V	.	.	L	L	F	L	T	H	G	E	S	S	T	G	V	L	Q	P	.	.	.	L	D	G	F	G	E	L	C	H	R	Y	K	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	L	Y	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A
Template Known Secondary structure												S	.	.						S			T	T	T	T					.	.	.		T	T							T	T	T								T	T	T	T	T	T	S				T	T	T	T	T		S						S	S	S	T	T
Template Predicted Secondary structure													.	.																	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
									239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																.	.	.	.	.																														.	.	.	.	.
Template Conservation																																								.	.	.	.	.																														.	.	.	.	.
Template Sequence		P	P	G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	L	A	N	F	W	.	.	.	.	.	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	.	.	.	.	.	E	Q	G
Template Known Secondary structure			T	T															T	T		S	S			S		S	T	T									T	.	.	.	.	.	T		S	S	S						S																			.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V
Query Conservation																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G	L	Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A	V	P	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	V	L	R	I	G	L
Template Known Secondary structure																								T			B	S	S		S	G	G	G	B		T	T								T	T																							G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
				379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	G	C	N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A	A	L
Template Known Secondary structure			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions