Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 39 Aligned Residues 363 % Identity 21% Template d1gdea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.80

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L
Query Conservation
Alig confidence																						.	.											.	.	.	.	.																					.	.
Template Conservation																						.	.											.	.	.	.	.																					.	.
Template Sequence		D	R	L	E	L	V	S	A	S	E	I	R	K	L	F	D	I	A	A	G	.	.	M	K	D	V	I	S	L	G	I	G	.	.	.	.	.	E	P	D	F	D	T	P	Q	H	I	K	E	Y	A	K	E	A	L	D	K	.	.	G	L	T	H	Y	G	P	N	I	G	L	L	E	L	R	E	A	I	A	E	K
Template Known Secondary structure							S															.	.		T	T								.	.	.	.	.	S			S																T	.	.	T			S				T	T
Template Predicted Secondary structure																						.	.											.	.	.	.	.																					.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D
Query Conservation
Alig confidence																			.																.	.
Template Conservation																			.																.	.
Template Sequence		L	K	K	Q	N	G	I	E	A	D	P	K	T	E	I	M	V	.	L	L	G	A	N	Q	A	F	L	M	G	L	S	A	F	.	.	L	K	D	G	E	E	V	L	I	P	T	P	A	F	V	S	Y	A	P	A	V	I	L	A	G	G	K	P	V	E	V	P	T	Y	E	E	D	E	F	R	L	N	V	D	E
Template Known Secondary structure												T	T	T	S				.		S	S	T	T								T	T	T	.	.			T	T								S			T	T									T										G	G	G	T	T
Template Predicted Secondary structure																			.																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S
Query Conservation
Alig confidence												.	.	.																																																		.
Template Conservation												.	.	.																																																		.
Template Sequence		L	K	K	Y	V	T	D	K	T	R	.	.	.	A	L	I	I	N	S	P	C	N	P	T	G	A	V	L	T	K	K	D	L	E	E	I	A	D	F	V	V	E	H	D	L	I	V	I	S	D	E	V	Y	E	H	F	I	Y	D	D	A	R	.	H	Y	S	I	A	S	L	D	G	M	F	E	R	T	I	T	V
Template Known Secondary structure								T	T			.	.	.						S	S		T	T	T																			T	T								T	T	T	T		B		T	T			.				G	G	G	S	T	T		G	G	G
Template Predicted Secondary structure												.	.	.																																																		.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		N	G	F	S	K	T	F	A	M	T	G	W	R	L	G	F	V	A	A	P	S	W	I	I	E	R	M	V	K	F	Q	M	.	.	.	.	.	.	.	Y	N	A	T	C	P	V	T	F	I	Q	Y	A	A	A	K	A	L	K	D	.	.	.	.	E	R	S	W	K	A	V	E	E	M	R	K	E	Y	D	R	R
Template Known Secondary structure				S	T	T	T	T	T		G	G	G																					.	.	.	.	.	.	.	T	T	T		S														T		.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.											.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A	N	V
Query Conservation																																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																			.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.							.
Template Conservation														.	.	.	.																																																										.
Template Sequence		R	K	L	V	W	K	R	L	N	E	M	G	.	.	.	.	L	P	T	V	K	P	K	G	A	F	Y	I	F	P	R	I	R	D	T	G	L	T	S	K	K	F	S	E	L	M	L	K	E	A	R	V	A	V	V	P	G	S	A	F	G	K	A	G	E	G	Y	V	R	I	S	Y	A	.	T	A	Y	E	K	L
Template Known Secondary structure												T	T	.	.	.	.								B	T	T					B		G	G	G	T														T							G	G	G	G		G	G	G	T	T	B							.	S
Template Predicted Secondary structure														.	.	.	.																																																										.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.
		387	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	A	M	D	R	M	E	R	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions