Return to main results Retrieve Phyre Job Id

Job DescriptionP04693
Confidence89.94%DateThu Jan 5 10:58:18 GMT 2012
Rank241Aligned Residues63
% Identity19%Templated1g5aa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160....... ..170.........180......... 190.........200.........210.........220
Predicted Secondary structure 
..










................












Query SS confidence 








. .





















. . . . . . . . . . . . . . . .






























Query Sequence  RFNDLLATL. . KTLPARSIVLLHPCCHNPTGAD. . . . . . . . . . . . . . . . LTNDQWDAVIEILKARELIPFLDIAYQGFGA
Query Conservation          
..         
      



  ................ 
   
  
   
      

 



     
Alig confidence 








..





















................






























Template Conservation 

 

  





 



 
 
 

          

   

  


  

  


 

  

  

 





 



 
Template Sequence  DLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSN
Template Known Secondary structure  STTT
S


B


SS
STTTTS
S
SSSB
TTT

TT


ST
Template Predicted Secondary structure 










































Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   221
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   191
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions