Return to main results Retrieve Phyre Job Id

Job DescriptionP04693
Confidence47.84%DateThu Jan 5 10:58:18 GMT 2012
Rank359Aligned Residues43
% Identity12%Templated1ea9c3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220.
Predicted Secondary structure 





















Query SS confidence 










































Query Sequence  HPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG
Query Conservation       



   
   
  
   
      

 



      
Alig confidence 










































Template Conservation    
   

   

  

  

   
  

 



 
 

    
Template Sequence  TEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRT
Template Known Secondary structure 
S
TT


TTT

TTTT



SB

TT
Template Predicted Secondary structure 























Template SS confidence 










































   205....210.........220.........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions