Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 46 Aligned Residues 367 % Identity 12% Template d1c7na_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		F	Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	.	.	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I
Query Conservation																										.	.
Alig confidence																										.	.										.	.	.	.	.																							.	.	.	.
Template Conservation																																					.	.	.	.	.																							.	.	.	.
Template Sequence		F	T	T	K	I	S	R	K	N	L	G	S	L	K	W	D	L	M	Y	S	Q	N	P	E	V	G	N	E	V	V	P	L	S	V	A	.	.	.	.	.	D	M	E	F	K	N	P	P	E	L	I	E	G	L	K	K	Y	L	D	E	T	V	.	.	.	.	L	G	Y	T	G	P	T	E	E	Y	K	K	T	V
Template Known Secondary structure		S							T	T	T	T												T	T			T	T						S	S	.	.	.	.	.	S		S	S																			.	.	.	.		S	S
Template Predicted Secondary structure																																					.	.	.	.	.																							.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	.	N	G	V
Query Conservation																																																																														.
Alig confidence																					.	.																.	.																																							.
Template Conservation																					.	.																.	.
Template Sequence		K	K	W	M	K	D	R	H	Q	W	D	I	Q	T	D	W	I	I	N	.	.	T	A	G	V	V	P	A	V	F	N	A	V	R	E	F	.	.	T	K	P	G	D	G	V	I	I	I	T	P	V	Y	Y	P	F	F	M	A	I	K	N	Q	E	R	K	I	I	E	C	E	L	L	E	K	D	G	Y	Y	T	I
Template Known Secondary structure															G	G	G				.	.		S	S													.	.			T	T							S	S			T								T	T	T												T	T
Template Predicted Secondary structure																					.	.																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		D	F	Q	K	L	E	K	L	S	K	D	.	.	K	N	N	K	A	L	L	F	C	S	P	H	N	P	V	G	R	V	W	K	K	D	E	L	Q	K	I	K	D	I	V	L	K	S	D	L	M	L	W	S	D	E	I	H	F	D	L	I	M	P	G	Y	E	H	T	V	F	Q	S	I	D	E	Q	L	A	D	K
Template Known Secondary structure											T		.	.	T	T								S	S	B	T	T	T	T	B																	S	S								T	T	T	T		B		T	T						G	G	G	S						T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R
Query Conservation
Alig confidence																											.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		T	I	T	F	T	A	P	S	K	T	F	N	I	A	G	M	G	M	S	N	I	I	I	K	N	.	.	.	.	.	.	P	D	I	R	E	R	F	T	K	S	R	D	A	T	S	G	M	P	F	T	T	L	G	Y	K	A	C	E	I	C	Y	.	.	.	.	.	K	E	C	G	K	W	L	D	G	C	I	K	V
Template Known Secondary structure								S					T		G	G	G										.	.	.	.	.	.														T	T																	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.											.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N
Query Conservation																																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																			.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.								.
Template Conservation																				.	.																																																											.
Template Sequence		I	D	K	N	Q	R	I	V	K	D	F	F	E	V	N	H	P	E	.	.	I	K	A	P	L	I	E	G	T	Y	L	Q	W	I	D	F	R	A	L	K	M	D	H	K	A	M	E	E	F	M	I	H	K	A	Q	I	F	F	D	E	G	Y	I	F	G	D	G	G	I	G	F	E	R	I	N	L	A	A	.	P
Template Known Secondary structure																		T	T	.	.	S	B					S	B	S	S							G	G	G														T	T							G	G	G	G		G	G	G	T	T								S	.
Template Predicted Secondary structure																				.	.																																																											.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	V	I	Q	E	S	L	E	R	L	N	K	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions