Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 45 Aligned Residues 362 % Identity 21% Template d1b5pa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.80

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	.	.	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A
Query Conservation																					.	.
Alig confidence																					.	.														.	.	.	.	.																					.	.
Template Conservation																																				.	.	.	.	.																					.	.
Template Sequence		R	R	V	Q	A	M	K	P	S	A	T	V	A	V	N	A	K	A	L	E	L	R	R	Q	G	V	D	L	V	A	L	T	A	G	.	.	.	.	.	E	P	D	F	D	T	P	E	H	V	K	E	A	A	R	R	A	L	A	Q	.	.	G	K	T	K	Y	A	P	P	A	G	I	P	E	L	R	E	A	L	A
Template Known Secondary structure																									T	T									S	.	.	.	.	.	S		S	S																T	.	.	T			S				T	T
Template Predicted Secondary structure																																				.	.	.	.	.																					.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F
Query Conservation
Alig confidence																				.	.																.	.
Template Conservation																				.	.																.	.
Template Sequence		E	K	F	R	R	E	N	G	L	S	V	T	P	E	E	T	I	V	.	.	T	V	G	G	S	Q	A	L	F	N	L	F	Q	A	I	.	.	L	D	P	G	D	E	V	I	V	L	S	P	Y	W	V	S	Y	P	E	M	V	R	F	A	G	G	V	V	V	E	V	E	T	L	P	E	E	G	F	V	P	D	P
Template Known Secondary structure							T	T						G	G	G				.	.		S														.	.			T	T								S			T									T	T										G	G	G	T	T
Template Predicted Secondary structure																				.	.																.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L
Query Conservation
Alig confidence														.	.	.																																																							.	.	.	.
Template Conservation														.	.	.																																																							.	.	.	.
Template Sequence		E	R	V	R	R	A	I	T	P	R	T	K	.	.	.	A	L	V	V	N	S	P	N	N	P	T	G	A	V	Y	P	K	E	V	L	E	A	L	A	R	L	A	V	E	H	D	F	Y	L	V	S	D	E	I	Y	E	H	L	L	Y	E	G	E	H	F	S	P	G	R	.	.	.	.	V	A	P	E	H	T	L
Template Known Secondary structure						T	T			T	T			.	.	.						S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	G	G	.	.	.	.	T		T	T	T
Template Predicted Secondary structure														.	.	.																																																							.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.																					.	.	.
Template Conservation																																				.	.	.	.	.	.	.																					.	.	.
Template Sequence		T	V	N	G	A	A	K	A	F	A	M	T	G	W	R	I	G	Y	A	C	G	P	K	E	V	I	K	A	M	A	S	V	S	R	.	.	.	.	.	.	.	Q	S	T	T	S	P	D	T	I	A	Q	W	A	T	L	E	A	L	T	N	.	.	.	Q	E	A	S	R	A	F	V	E	M	A	R	E	A	Y	R
Template Known Secondary structure						S	T	T	T	T	T		G	G	G																					.	.	.	.	.	.	.	T	T	T		S																.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A	N	V	Q
Query Conservation																																				.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																	.	.	.	.	.																				.	.	.	.	.	.	.	.							.
Template Conservation																.	.	.	.																																																							.
Template Sequence		R	R	R	D	L	L	L	E	G	L	T	A	L	G	.	.	.	.	L	K	A	V	R	P	S	G	A	F	Y	V	L	M	D	T	S	P	I	A	P	D	E	V	R	A	A	E	R	L	L	E	A	G	V	A	V	V	P	G	T	D	F	A	A	F	G	H	V	R	L	S	Y	A	.	T	S	E	E	N	L	R
Template Known Secondary structure															T	.	.	.	.			B				S	B	T	T							T	T	T		S	S											T	T						S	G	G	G	T		T	T								.	S
Template Predicted Secondary structure																.	.	.	.																																																							.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.
		388	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	E	R	F	A	R	V	L
Template Known Secondary structure							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions