Phyre 2 alignment of P04693 with c3tqxA

Job Description P04693
Confidence 99.95% Date Thu Jan 5 10:58:18 GMT 2012

Rank 112 Aligned Residues 333

% Identity 13% Template c3tqxA_

PDB info PDB header:transferase Chain: A: PDB Molecule:2-amino-3-ketobutyrate coenzyme a ligase; PDBTitle: structure of the 2-amino-3-ketobutyrate coenzyme a ligase (kbl) from2 coxiella burnetii

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A
Query Conservation
Alig confidence																														.	.	.																																.	.	.	.	.	.
Template Conservation																														.	.	.																																.	.	.	.	.	.
Template Sequence	V	L	N	F	C	A	N	N	Y	L	G	L	A	D	H	P	A	L	I	K	T	A	Q	T	V	V	E	Q	Y	.	.	.	G	F	G	X	A	S	V	R	F	I	C	G	T	Q	T	I	H	K	E	L	E	K	D	I	S	E	F	L	G	T	D	.	.	.	.	.	.	D	T	I	L	Y	S	S	C	F	D	A
Template Known Secondary structure					S	S			T	T	S		T	T																.	.	.		S				S																							T		S	.	.	.	.	.	.						S
Template Predicted Secondary structure																														.	.	.																																.	.	.	.	.	.
Template SS confidence
	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.

	108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G
Query Conservation
Alig confidence									.	.																																						.	.	.	.
Template Conservation									.	.																																						.	.	.	.
Template Sequence	N	G	G	L	F	E	T	L	.	.	L	G	P	E	D	A	I	I	S	D	E	L	N	H	A	S	I	I	D	G	I	R	L	C	K	A	Q	R	Y	R	Y	K	N	N	A	X	G	.	.	.	.	D	L	E	A	K	L	K	E	A	D	E	K	G	A	R	F	K	L	I	A	T	D	G	V	F	S	X	D	G
Template Known Secondary structure			T	T					.	.			T	T							T	T											S			S							T	T		T	T	.	.	.	.											T	T	T		S	S							S			T	T	T	T
Template Predicted Secondary structure									.	.																																						.	.	.	.
Template SS confidence
	113	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

	188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E
Query Conservation
Alig confidence					.	.	.																															.																										.	.
Template Conservation					.	.	.																															.																										.	.
Template Sequence	I	I	A	D	.	.	.	L	K	S	I	C	D	L	A	D	K	Y	N	A	L	V	X	V	D	D	S	H	A	V	G	F	I	G	E	N	G	.	R	G	T	P	E	Y	C	G	V	A	D	R	V	D	I	L	T	G	T	L	G	K	A	L	G	.	.	G	A	S	G	G	Y	T	S	G	H	K	E	I	I	E
Template Known Secondary structure					.	.	.											T	T								T	T	T	T	T	T	S	S	T	T	S	.								T		T	T			S						S	S	S	S	S		.	.	S	S
Template Predicted Secondary structure					.	.	.																															.																										.	.
Template SS confidence
	187	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

	268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G
Query Conservation
Alig confidence										.	.	.	.	.																			.	.	.	.	.	.																																.	.	.	.	.
Template Conservation										.	.	.	.	.																			.	.	.	.	.	.																																.	.	.	.	.
Template Sequence	W	L	R	N	R	S	R	P	Y	.	.	.	.	.	L	F	S	N	T	V	A	P	V	I	V	A	T	S	L	K	V	L	.	.	.	.	.	.	E	L	L	K	T	E	G	P	Q	L	R	K	Q	L	Q	E	N	S	R	Y	F	R	A	G	X	E	K	L	G	F	Q	.	.	.	.	.	L	V	P	G	N	H
Template Known Secondary structure										.	.	.	.	.		S	S																.	.	.	.	.	.						T																							T			.	.	.	.	.	B				S	S
Template Predicted Secondary structure										.	.	.	.	.																			.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
	261	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.

	348	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence								.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence	M	F	S	Y	T	G	L	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation								.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence								.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence	P	I	I	P	V	X	L	G	D	A	Q	L	A	T	N	X	A	D	H	L	L	Q	E	G	I	Y	V	V	G	F	S	Y	P	V	V	P	X	G	K	A	R	I	R	V	Q	X	S	A	V	H	T	Q	Q	Q	L	D	R	A	I	E	A	F	G	Q	V	G
Template Known Secondary structure	S																						T	T								T	T	T	S		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
	325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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