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Job DescriptionP04693
Confidence100.00%DateThu Jan 5 10:58:18 GMT 2012
Rank61Aligned Residues354
% Identity15%Templatec3pdxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine aminotransferase; PDBTitle: crystal structural of mouse tyrosine aminotransferase
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  KEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQ
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Template Sequence  KPNPNKTVISLSIGDP. TVFGNLPTDPEVTQAMKDALDSG. KYNGYAPSIGYLSSREEVASYYHCP. EAPLEAKDVIL. .
Template Known Secondary structure 


TTS


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   66...70.........80. ........90.........100.... .....110.........120......... 130.........140
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP
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Template Sequence  TSGCSQAIELCLAVL. . ANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDE. . . KTACLVVN
Template Known Secondary structure  SSTT..

SS

SS

T


GGGTT
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S...S
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   141........150..... ....160.........170.........180.........190.........200....... ..210.....
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLS
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Template Sequence  NPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTN. . . VPILSCGGLARWLVPGWRLGWIL
Template Known Secondary structure  SS
TTT




TTTT


TTTT
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GGGG
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   216...220.........230.........240.........250.........260......... 270.........280.........290..
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  VMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFD
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Template Sequence  IHDRRDIFGNEIRDGLVKLS. QRILGPCTIVQGALKSILQ. . . . . RTPQEFYQDTLSFLKSNADLCYGALSAIP. . . GLQ
Template Known Secondary structure 
SSSSS.TTT

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   294.....300.........310... ......320.........330.. .......340.........350.........360. ...
 
   341........350.... .....360.........370... ......380.........390.......
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Query Sequence  YLLNQRGMFSYTGL. . . . . . . . . . SAAQVDRLREEFGVYLIAS. . . . . . . . GRMCVAGLNTANVQRVAKAFAAVM
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Template Sequence  PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVIT. VPEVMMLEACSRIQEFC
Template Known Secondary structure 
B


BTTB
TTS

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GGGGT

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   365....370.........380.........390.........400.........410.........420. ........430........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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