Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 78 Aligned Residues 305 % Identity 19% Template c3p1tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution Resolution 2.60 Å

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		35	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	Y	Y	N	E	D	G	I	I	.	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D
Query Conservation											.
Alig confidence											.																	.	.	.								.														.	.	.	.	.	.										.	.
Template Conservation																												.	.	.								.														.	.	.	.	.	.										.	.
Template Sequence		V	C	L	A	F	N	E	N	P	E	A	V	E	P	R	V	Q	A	A	I	A	A	A	A	A	R	.	.	.	I	N	R	Y	P	F	D	.	A	E	P	R	V	X	R	K	L	A	E	H	F	.	.	.	.	.	.	S	C	P	E	D	N	L	X	L	.	.	V	R	G	I	D	E	C	F	D	R	I	S	A
Template Known Secondary structure					S	S					S														G	G	G	.	.	.	T	T	S			T	T	.													T	.	.	.	.	.	.	T	S		G	G	G				.	.		S
Template Predicted Secondary structure																												.	.	.								.														.	.	.	.	.	.										.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D
Query Conservation
Alig confidence				.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation				.	.	.	.																																						.	.	.	.	.	.	.
Template Sequence		E	F	.	.	.	.	S	S	X	R	F	V	T	A	W	P	G	F	D	G	Y	R	A	R	I	A	V	S	G	L	R	H	F	E	I	G	L	T	D	D	L	L	L	.	.	.	.	.	.	.	D	P	N	D	L	A	Q	V	S	R	D	D	C	V	V	L	A	N	P	S	N	P	T	G	Q	A	L	S	A	G
Template Known Secondary structure			S	.	.	.	.	T	T	S						S	S	S		S										T								B		T	T	S	S	B	.	.	.	.	.	.	.						T	T			T	T							S	S		T	T	T
Template Predicted Secondary structure				.	.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		86	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L
Query Conservation
Alig confidence							.	.	.	.																					.	.	.	.	.	.	.
Template Conservation							.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		E	L	D	Q	L	.	.	.	.	R	Q	R	A	G	K	L	L	I	D	E	T	Y	V	D	Y	S	S	F	R	.	.	.	.	.	.	.	A	R	G	L	A	Y	G	E	N	E	L	V	F	R	S	F	S	K	S	Y	G	L	A	G	L	R	L	G	A	L	F	G	P	S	E	L	I	A	A	X	K	R	K	Q
Template Known Secondary structure							.	.	.	.					S							T	T	G	G	G	S	S		S	.	.	.	.	.	.	.	T	T					B	T	T							S	S	S	T	T	S		T	T	T																	T	T	S
Template Predicted Secondary structure							.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	W	F	C	N	V	G	T	L	D	L	H	A	L	E	A	A	L	D	N	.	.	.	.	.	.	.	D	R	A	R	E	A	H	I	A	K	T	L	A	Q	R	R	R	V	A	D	A	L	R	G	L	G	Y	R	.	.	.	.	.	V	A	S	S	E	A	N	F	V	L	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T	S	S													S		.	.	.	.	.	.	.																									T	T			.	.	.	.	.	B				S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
											224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.
		354		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure			.																				.	.	.	.	.	.	.	.
Query SS confidence			.																				.	.	.	.	.	.	.	.
Query Sequence		L	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V
Query Conservation			.																				.	.	.	.	.	.	.	.
Alig confidence			.																				.	.	.	.	.	.	.	.							.	.
Template Conservation																																					.	.
Template Sequence		N	A	A	G	E	R	T	L	R	F	L	R	E	R	G	I	Q	V	K	D	A	G	Q	F	G	L	H	H	H	I	R	I	S	I	G	.	.	R	E	E	D	N	D	R	L	L	A	A	L	A	E	Y
Template Known Secondary structure			T	T	T										T	T						G	G	G	G	T			S								.	.
Template Predicted Secondary structure																																					.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions