Job Description P04693 Confidence 99.89% Date Thu Jan 5 10:58:18 GMT 2012 Rank 175 Aligned Residues 302 % Identity 16% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	.	.	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y
Query Conservation																									.	.
Alig confidence																									.	.								.																.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																		.																.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		T	S	G	Y	V	Y	G	S	A	A	V	A	E	K	S	F	A	G	E	L	D	H	Y	V	Y	S	R	Y	G	N	P	T	.	V	S	V	F	E	E	R	L	R	L	I	E	G	A	P	.	.	.	.	.	.	.	.	.	.	A	A	F	A	T	A	S	G	M	A	A	V	F	T	S	L	G	A	L	.	.	L
Template Known Secondary structure			S	B				S	S									T	T	S	S					B	T	T	T					.													T		S	.	.	.	.	.	.	.	.	.	.						S	S											T	T	.	.
Template Predicted Secondary structure																																		.																.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	.	.	.	.	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																			.	.	.	.	.	.	.															.	.	.																	.	.	.
Template Conservation																																							.	.	.	.	.	.	.															.	.	.																	.	.	.
Template Sequence		G	A	G	D	R	L	V	A	A	R	S	L	F	G	S	C	F	V	V	C	S	E	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D	.	.	.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	V	P	T	Q	.	.	.	A	V	F	F	E	T	P	S	N	P	M	Q	S	L	V	D	.	.	.
Template Known Secondary structure			T	T							S	S											T					T	T								T	T	.	.	.	.	.	.	.									T	T	S			S	.	.	.						S	S		T	T	T						.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.															.	.	.																	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		I	A	A	V	T	E	L	A	H	A	A	G	A	K	V	V	L	D	N	V	F	.	.	.	.	.	.	.	.	.	.	A	T	P	L	L	Q	Q	G	F	P	L	G	V	D	V	V	V	Y	S	G	T	H	I	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	.	.	.	.	.	.	E	Y	I	D	G
Template Known Secondary structure												T	T								T	T	.	.	.	.	.	.	.	.	.	.	T								G	G	G	T		S										S		S	S												.	.	.	.	.	.					T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A	W	V	L	L	K	G	.	.	.	.	.	.	.	.	.	.	L	E	T	L	A	I	R	V	Q	H	S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	P	S	V	R	W	V	R	Y	P	Y	L	P	S	H	P	Q	Y	D	L	A	K
Template Known Secondary structure																										.	.	.	.	.	.	.	.	.	.																								T		T	T							T	T	S	T	T	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
				342	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.																																		.	.		.	.	.	.	.	.	380
Predicted Secondary structure		.	.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query SS confidence		.	.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query Sequence		.	.	L	L	N	Q	R	G	M	F	S	Y	.	.	.	.	.	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	.	G	R	M	C	V	A	G
Query Conservation		.	.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Alig confidence		.	.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.						.
Template Conservation																																																																																.
Template Sequence		R	Q	M	S	G	G	G	T	V	V	T	F	A	L	D	C	P	E	D	V	A	K	Q	R	A	F	E	V	L	D	K	M	R	L	I	D	I	S	N	N	L	G	D	A	K	S	L	V	T	H	P	A	T	T	T	H	R	A	M	G	P	E	G	R	A	A	I	G	L	G	D	G	V	V	R	I	S	V	.	G
Template Known Secondary structure					S	S			S							S	S		G	G	G													S	S	S				S			S		S	S						G	G	G	T	T	T	S	T	T							T	T	T			T	T							.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		L	.	.	E	D	T	D	D	L	I	A	D	I	D	R	A	L
Template Known Secondary structure		S	.	.	S
Template Predicted Secondary structure			.	.
Template SS confidence
		391			.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions