Job Description P04693 Confidence 99.62% Date Thu Jan 5 10:58:18 GMT 2012 Rank 234 Aligned Residues 342 % Identity 15% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L
Query Conservation
Alig confidence																		.	.														.	.	.	.																									.	.	.	.	.
Template Conservation																		.	.														.	.	.	.																									.	.	.	.	.
Template Sequence		L	D	G	X	S	G	L	W	C	V	N	S	G	Y	G	R	.	.	K	E	L	A	E	A	A	Y	K	Q	L	Q	T	.	.	.	.	L	S	Y	F	P	X	S	Q	S	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	.	.	.	.	.	G	G	E	Y	V	I	F	F	S	N	S	G	S	E	A	N
Template Known Secondary structure				T	T					T		T	T		B			.	.												T	T	.	.	.	.		S				T	T	S																	.	.	.	.	.	T	S								S	S
Template Predicted Secondary structure																		.	.														.	.	.	.																									.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.														.	.	.	.	.	150											.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	A	D	F	L	K	R	Y	F	P	.	.	.	.	.	.	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	Y	P	W	.	.	.	.	.	.	.	.	.	.	Y	D	E	A	T	N	G	V	R
Query Conservation														.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	A	F	K	I	A	R	Q	Y	Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q	Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y	D	V	E	C
Template Known Secondary structure														T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T	T					S										T	T	T	S	T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure									.																						.
Query SS confidence									.																						.
Query Sequence		F	N	D	L	L	A	T	.	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	.	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L
Query Conservation									.																						.
Alig confidence									.																						.																																																	.	.
Template Conservation																																																																																.	.
Template Sequence		V	K	E	V	D	R	V	X	T	W	E	L	S	E	T	I	A	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C	Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	A	F	G	F	X	N	Y	D	V	K	P	D	.	.
Template Known Secondary structure														G	G	G								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T
Query Conservation
Alig confidence		.	.	.	.																																	.																											.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																	.																											.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	I	I	T	X	A	K	G	I	T	S	A	Y	L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	.	E	Y	E	F	F	R	H	I	N	T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	.	.	.	.	.	.	.	.	I	I	E	N	E	N	L	I	E
Template Known Secondary structure		.	.	.	.						G	G	G	G	T	T	S	S													G	G	G		S	S	S	.	T	T		S						S	S	S	S														.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure		.	.	.	.																																	.																											.	.	.	.	.	.	.	.
Template SS confidence
						276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.															.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.
Template Sequence		R	S	A	Q	X	G	S	L	L	L	E	Q	L	K	E	E	I	G	E	H	P	L	V	G	D	I	R	G	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	.	G	L	I	I	G	R	N	G	X	T	T	A	G	Y	N	N	I
Template Known Secondary structure																			T	T	S	T	T							S	S	S										T	T	T	T																		T	.	T							T	T	S	S	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		374	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	T	L	A	P	P	L	V	I	S	S	E	E	I	A	F	V	I	G	T	L	K	T	A	X
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions