Job Description P04693 Confidence 99.77% Date Thu Jan 5 10:58:18 GMT 2012 Rank 224 Aligned Residues 317 % Identity 12% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	.	.	.	.	.	.	.	.	.	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		K	I	N	F	S	A	G	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	.	.	.	.	.	.	E	L	N	D	D	Y	E	V	L	F	L	Q	G	G	A	S
Template Known Secondary structure							S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			.	.	.	.	.	.	T			T	T							S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	.	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N
Query Conservation																														.
Alig confidence												.	.																	.																																	.	.	.	.	.	.
Template Conservation												.	.																																																		.	.	.	.	.	.
Template Sequence		L	Q	F	A	X	I	P	X	N	L	.	.	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F	D	H	I	P	R	V	E	F	S	.	.	.	.	.	.	D	N	A	D	Y	A	Y	I	C	S	N	N	T
Template Known Secondary structure												.	.			S	S								S													T	T										T	T	T	T	S		S								.	.	.	.	.	.	T	T	S	S						S			T
Template Predicted Secondary structure												.	.																																																		.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		I	Y	G	T	Q	Y	Q	N	Y	.	.	.	.	.	.	.	.	.	P	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	S	R	K	V	.	.	.	.	.	.	.	.	.	.	.	D	F	S	N	I	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	L	.	.	S	C	I	F	I	R	K	D
Template Known Secondary structure		T	T	T				S	S		.	.	.	.	.	.	.	.	.				S	S							G	G	G	T	T	S	S			.	.	.	.	.	.	.	.	.	.	.			T	T								T	T	T	T	S	S		T	T		.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.							.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																				.	.
Query SS confidence														.	.	.	.	.	.																																				.	.
Query Sequence		D	A	E	A	A	G	R	V	L	G	Q	L	.	.	.	.	.	.	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	.	.	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E
Query Conservation														.	.	.	.	.	.																																				.	.
Alig confidence														.	.	.	.	.	.																								.	.	.	.	.	.							.	.																								.	.
Template Conservation																																											.	.	.	.	.	.																																.	.
Template Sequence		X	L	E	R	S	K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	.	.	.	.	.	.	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	.	.
Template Known Secondary structure								T					G	G	G								T	T	T		S	S															.	.	.	.	.	.					T	T	T																						T	S	T	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.																																.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.									.	.																		.	.	.	.	.	.						.
Query SS confidence														.	.	.	.	.	.	.									.	.																		.	.	.	.	.	.						.
Query Sequence		R	N	F	D	Y	L	L	N	Q	R	G	M	.	.	.	.	.	.	.	F	S	Y	T	G	L	S	A	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V
Query Conservation														.	.	.	.	.	.	.									.	.																		.	.	.	.	.	.						.
Alig confidence		.												.	.	.	.	.	.	.									.	.																		.	.	.	.	.	.						.
Template Conservation		.
Template Sequence		.	G	F	Y	K	G	H	A	D	K	K	D	R	S	L	X	N	V	S	F	N	I	A	K	N	K	D	L	E	P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	R	I	L	G	G	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E	F
Template Known Secondary structure		.	T	S				S	S		G	G	G	B		S	S							S	S		T	T												T	T					B			T	T	T		S							T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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