Job Description P04693 Confidence 99.93% Date Thu Jan 5 10:58:18 GMT 2012 Rank 139 Aligned Residues 312 % Identity 14% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	.	.	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G
Query Conservation																						.	.
Alig confidence																						.	.																			.	.	.	.	.	.						.	.	.	.																			.
Template Conservation																																										.	.	.	.	.	.						.	.	.	.																			.
Template Sequence		K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	.	.	.	.	.	.	G	X	D	D	A	.	.	.	.	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L	R	I	W	S	.	D	E	T	D	N	R
Template Known Secondary structure													T	T	S		T	T						T	T			T	T												T	.	.	.	.	.	.	T		S			.	.	.	.				S															.				T
Template Predicted Secondary structure																																										.	.	.	.	.	.						.	.	.	.																			.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		V	W	V	S	D	P	T	W	E	N	H	V	.	.	.	.	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	L	X	T	.	.	.	.	.	.	.	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E	L	E	T	I	S
Template Known Secondary structure							T	T						S	S	T	T						S	S							S		T	T	S				.	.	.	.	.	.	.									S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T
Query Conservation
Alig confidence																																						.	.	.	.															.	.	.																			.	.	.	.	.
Template Conservation																																						.	.	.	.															.	.	.																			.	.	.	.	.
Template Sequence		R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	.	.	.	.	S	I	Y	I	S	F	Y	G	L	G	G	I	A	G	.	.	.	A	I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	K	R	.	.	.	.	.
Template Known Secondary structure								T								T	T									T								T	T		S	.	.	.	.												S	S		.	.	.																			.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.															.	.	.																			.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence		.	.																				.	.	.	.	.	.	.	.																																																.	.	.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.
Template Sequence		.	.	R	Y	G	G	D	L	I	S	L	Y	P	Y	I	V	S	A	D	Y	Y	.	.	.	.	.	.	.	.	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I
Template Known Secondary structure		.	.			T				S													.	.	.	.	.	.	.	.					T	T																			S	T	T					S	S	S		S	S	S								S
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.
Template SS confidence
				231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.									250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.								.	.	.	.
Query Sequence		A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	.	.	.	.	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation																				.	.	.	.	.	.	.	.	.								.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		S	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A	F
Template Known Secondary structure																S		S						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions