Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 7 Aligned Residues 394 % Identity 31% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		L	L	S	S	L	E	N	I	E	V	D	N	I	L	K	T	A	R	E	F	K	E	D	T	C	E	E	K	I	N	L	S	I	G	V	C	C	N	D	D	G	D	L	H	I	F	D	S	V	L	N	A	D	K	L	V	T	E	N	Y	K	.	E	K	P	Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q
Template Known Secondary structure		G	G	G	G																	T	T	S	S		S	S					S		S	S		B		T	T	S	S	B																			.						T	T	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	.	M	L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R	G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y
Template Known Secondary structure							S	S		T	T	T	T	T	T																							.	T	T	T								S	S											T	T	T											T	T	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	.	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		D	L	F	L	N	D	L	R	N	I	P	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K	H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F
Template Known Secondary structure											S		S	S								S	S		T	T	T																												S		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K	N	Q	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S	S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I
Template Known Secondary structure								T	T	T	S			T	T	T	T									S	S																	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	.	.	.	.	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	G	R	M	C	V	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																									.
Template Conservation																																																	.
Template Sequence		T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q	K	K	Y	N	L	N	Y	D	W	N	V	Y	K	K	Q	R	G	L	F	S	F	V	P	L	L	A	K	I	A	E	H	L	.	K	T	H	H	I	Y	I	I	N	N	G	R	I	N	V	S	G	I	T	K	N	N	V	D	Y	I	A	D	K	I	C	L
Template Known Secondary structure																G	G	G	G	T					G	G	G	G	S	S			S	S					G	G	G	G	G	G	T	T	T	T	.	T	T	T	T					T	T	S				G	G	G			T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		396	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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