Job Description P04693 Confidence 99.59% Date Thu Jan 5 10:58:18 GMT 2012 Rank 235 Aligned Residues 250 % Identity 12% Template c3hvyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution Resolution 2.00 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	.	.	.	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W
Query Conservation																																																								.	.	.
Alig confidence																																												.	.	.	.	.	.							.	.	.														.	.
Template Conservation																																												.	.	.	.	.	.																							.	.
Template Sequence		V	L	K	A	F	Q	E	E	R	I	S	E	S	H	F	T	N	S	S	G	Y	G	Y	N	D	I	G	R	D	S	L	D	R	V	Y	A	N	I	F	N	T	E	.	.	.	.	.	.	S	A	F	V	R	P	H	F	V	N	G	T	H	A	I	G	A	A	L	F	G	N	.	.	L	R	P	N	D	T	X	X
Template Known Secondary structure									T	T			G	G	G	S					T	T		T	T																T		S	.	.	.	.	.	.						T	T		S	S												T	.	.			T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.																							.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.													.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	D	P	T	W	E	N	H	V	A	I	F	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																										.	.	.
Template Sequence		S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K	K	V	G	S	L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	D	G	.	.	.	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	S	I	K	L	I	H	I	Q	R	S	T	G	Y	G	W	R	K	S	L	R	I	A
Template Known Secondary structure			S	S	S	S			G	G	G					T			T	T			S			T	G	G	G	T									B	T	T	.	.	.	B														T	T								S	S			S	S	S	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																																.	.	.
Query SS confidence															.	.																																																.	.	.
Query Sequence		Q	W	D	A	V	I	E	I	L	K	A	R	E	.	.	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	.	.	.	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A
Query Conservation															.	.																																																.	.	.
Alig confidence															.	.																.	.	.	.										.	.	.	.	.												.	.		.	.	.
Template Conservation																																.	.	.	.										.	.	.	.	.												.	.
Template Sequence		E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C	Y	G	E	F	V	E	E	.	.	.	.	K	E	P	T	D	V	G	A	D	.	.	.	.	.	I	I	A	G	S	L	I	K	N	I	G	.	.	G	G	I	A	T	T	G	G	Y	I	A	G	K	E	E	Y	V	T	Q
Template Known Secondary structure															S	S	S							T	T	T	T	T	T	S	S	.	.	.	.	S		G	G	G	G	T		S	.	.	.	.	.						T	T	S	G	G	G	.	.	T	T	T			S
Template Predicted Secondary structure																																.	.	.	.										.	.	.	.	.												.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		A	.	.	T	F	R	V	T	V	P	G	I	G	G	E	C	G	S	T	F	G	V	X	R	S	L	Y	E	G	L	F	X	A	P	H	V	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	L	A
Template Known Secondary structure			.	.					S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		266			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions