Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 27 Aligned Residues 342 % Identity 25% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	D	A	Y	A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L
Query Conservation
Alig confidence																										.								.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.								.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	D	P	F	I	V	X	D	V	X	E	A	A	R	R	A	E	E	A	G	R	R	.	I	I	H	X	E	V	G	.	.	.	.	.	Q	P	G	T	G	A	P	R	G	A	V	E	A	L	A	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	P	A	L	R	Q	R	I	A	R	L
Template Known Secondary structure		T						T	T													T	T			.							S	.	.	.	.	.	S		S	S		S													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.								.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D
Query Conservation
Alig confidence																		.	.																.	.
Template Conservation																		.	.																.	.
Template Sequence		Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	.	.	T	P	G	S	S	G	G	F	L	L	A	F	T	A	L	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	P	A	D
Template Known Secondary structure												G	G	G				.	.		S	S													.	.			T	T								S												T	T										G	G	G	T	T	S
Template Predicted Secondary structure																		.	.																.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S
Query Conservation
Alig confidence					.	.	.	.	.	.																																																									.	.	.	.	.
Template Conservation					.	.	.	.	.	.																																																									.	.	.	.	.
Template Sequence		F	A	G	.	.	.	.	.	.	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	.	.	.	.	.	L	E	L	T	D	E	C	Y	V	I
Template Known Secondary structure			T	T	.	.	.	.	.	.	S			S						S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	.	.	.	.	.	G	G	T		S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.																																																									.	.	.	.	.
Template SS confidence
		157	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	.	.	.	.	.	.	.	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	.	.	.	.	.	.	.	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N
Template Known Secondary structure				S	S	S	T	T			T	T	S									G	G	G										.	.	.	.	.	.	.		T	T															T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.							.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.												.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	.	.	.	.	.	.	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	G	.	.	.	.	.	.	.	.	.	.	.	R	M	C	V	A	G	L	N	T	A	N
Query Conservation																																			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation														.	.	.																																																													.
Template Sequence		R	K	L	X	L	E	R	L	P	K	A	G	.	.	.	F	T	R	I	A	P	P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	R	.	A	T	A	D
Template Known Secondary structure													T	.	.	.				B					B	T	T							T	T	T		S																				G	G	G	T		T	T	T	G	G	G								S	.
Template Predicted Secondary structure														.	.	.																																																													.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.
		386	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R	V	A	K	A	F	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	E	G	L	D	R	L	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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