Job Description P04693 Confidence 99.97% Date Thu Jan 5 10:58:18 GMT 2012 Rank 91 Aligned Residues 324 % Identity 11% Template c3ffrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution Resolution 1.75 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	.	.	.	.	.	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q
Query Conservation																																																	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																			.	.	.	.	.	.								.	.	.	.	.																			.	.	.
Template Conservation											.	.	.	.	.	.	.																			.	.	.	.	.	.																															.	.	.
Template Sequence		N	N	K	I	Y	F	T	P	G	.	.	.	.	.	.	.	P	S	E	L	Y	P	T	V	R	Q	H	X	I	T	A	L	D	E	.	.	.	.	.	.	K	I	G	V	I	S	H	R	S	K	K	F	E	E	V	Y	K	T	A	S	D	N	L	K	T	L	L	E	L	P	.	.	.	S	N	Y	E	V	L	F
Template Known Secondary structure									S	S	.	.	.	.	.	.	.	S					T	T											T	.	.	.	.	.	.	T	T	T	T	S		T	T	S																		T	T			.	.	.	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.																			.	.	.	.	.	.																															.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P
Query Conservation
Alig confidence																	.	.																																					.	.									.	.	.	.	.
Template Conservation																	.	.																																					.	.									.	.	.	.	.
Template Sequence		L	A	S	A	T	E	I	W	E	R	I	I	Q	N	C	.	.	V	E	K	K	S	F	H	C	V	N	G	S	F	S	K	R	F	Y	E	F	A	G	E	L	G	R	E	A	Y	K	E	E	A	A	F	G	.	.	K	G	F	Y	P	A	D	I	.	.	.	.	.	T	V	P	A	D	A	E	I	I	C	L	T
Template Known Secondary structure			S														.	.		S	S								S													T	T										T	T	.	.					G	G	G		.	.	.	.	.				T	T
Template Predicted Secondary structure																	.	.																																					.	.									.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S
Query Conservation
Alig confidence													.	.	.																														.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation													.	.	.																														.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		H	N	E	T	S	S	G	V	S	X	P	.	.	.	V	E	D	I	N	T	F	R	D	K	N	K	D	A	L	I	F	V	D	A	V	S	S	L	P	Y	P	K	F	.	.	.	.	.	.	.	.	.	.	D	W	T	K	I	D	S	V	F	F	S	V	Q	C	F	G	L	P	A	G	.	.	L	G	V	W	I
Template Known Secondary structure		S			T	T	T	T					.	.	.					T	T	S	G	G	G	S	T	T	S							T	T	T	T	T	S	S			.	.	.	.	.	.	.	.	.	.		T	T	S		S													S		.	.
Template Predicted Secondary structure													.	.	.																														.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.															.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	C	E	D	A	E	A	A	G	R	V	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		L	N	D	R	V	I	E	K	S	K	A	L	L	A	K	R	K	S	I	G	T	Y	H	T	I	P	S	X	L	E	K	A	R	V	N	Q	T	P	E	T	P	N	A	X	N	I	F	L	L	G	K	V	T	G	.	.	.	.	.	D	X	L	Q	I	S	A	D	G	I	R	K	Q	T	E	E	K	A	A	L	I
Template Known Secondary structure																T	T					S	T	T	S									T	T	T			S	S																.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.							.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Query SS confidence																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Query Sequence		V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	.	.	.	.	.	.	M	F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K
Query Conservation																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Alig confidence										.	.	.											.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Template Conservation										.	.	.
Template Sequence		N	T	Y	I	E	S	S	K	.	.	.	V	F	S	F	G	V	E	D	A	K	L	R	S	X	T	T	I	V	A	N	T	T	X	L	P	G	E	I	N	K	I	L	E	P	F	D	X	A	V	G	A	G	Y	G	S	K	K	E	T	Q	I	R	I	A	N	F	P	A	H	S	L	E	Q	V	H	K	L	V	Q
Template Known Secondary structure									S	.	.	.	S				S	S	S		G	G	G	B		S	S							S	S										G	G	G	T							S	G	G	G	T	T	T								T	T	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		392	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	K	E	K	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions