Job Description P04693 Confidence 100.00% Date Thu Jan 5 10:58:18 GMT 2012 Rank 52 Aligned Residues 353 % Identity 16% Template c3dc1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kynurenine/alpha-aminoadipate aminotransferase PDBTitle: crystal structure of kynurenine aminotransferase ii complex with2 alpha-ketoglutarate Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	.	.	.	.	.	.	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	.	.	.	.	.	P	V	L	K
Query Conservation																																							.	.	.	.	.	.																													.	.	.	.	.
Alig confidence													.	.	.																								.	.	.	.	.	.																													.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		G	P	K	S	M	I	S	L	A	G	G	.	.	.	L	P	N	P	N	M	F	P	F	K	T	A	V	I	T	V	E	N	G	K	T	I	Q	F	G	E	E	M	M	K	R	A	L	Q	Y	S	P	S	A	G	I	P	E	L	L	S	W	L	K	Q	L	Q	I	K	L	H	N	P	P	T	I	H	Y	P	P	S
Template Known Secondary structure				S	S								.	.	.				G	G	G		S									T	T	S														T	S				T	T																	T			T	T	T	T	S		G	G
Template Predicted Secondary structure													.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																									.	.																																					.	.	.														.	.	.
Template Conservation																									.	.																																					.	.	.
Template Sequence		Q	G	Q	M	D	L	C	V	T	S	G	S	Q	Q	G	L	C	K	V	F	E	M	I	.	.	I	N	P	G	D	N	V	L	L	D	E	P	A	Y	S	G	T	L	Q	S	L	H	P	L	G	C	N	I	I	N	V	A	S	D	E	S	.	.	.	G	I	V	P	D	S	L	R	D	I	L	S	R	W	K	P
Template Known Secondary structure		G	T								S	S													.	.			T	T							S	S										G	G	G	T										T	T	.	.	.												T	T	S		G
Template Predicted Secondary structure																									.	.																																					.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																											.	.
Template Conservation																																																																			.	.
Template Sequence		E	D	A	K	N	P	Q	K	N	T	P	K	F	L	Y	T	V	P	N	G	N	N	P	T	G	N	S	L	T	S	E	R	K	K	E	I	Y	E	L	A	R	K	Y	D	F	L	I	I	E	D	D	P	Y	Y	F	L	Q	F	N	K	F	R	V	P	T	.	.	F	L	S	M	D	V	D	G	R	V	I	R	A
Template Known Secondary structure		G	G	G	S		G	G	G				S							S	S		T	T	T																				T								T	T	T	T		B	S	S	S	S					.	.	S	G	G	G		S	S	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M
Query Conservation
Alig confidence									.	.																								.	.	.	.	.	.	.																							.
Template Conservation									.	.																								.	.	.	.	.	.	.																							.
Template Sequence		D	S	F	S	I	I	S	.	.	S	G	L	R	I	G	F	L	T	G	P	K	P	L	I	E	R	V	I	L	H	I	Q	.	.	.	.	.	.	.	V	S	T	L	H	P	S	T	F	N	Q	L	M	I	S	Q	L	L	H	E	W	G	.	E	E	G	F	M	A	H	V	D	R	V	I	D	F	Y	S	N	Q
Template Known Secondary structure									.	.	S	T	T																				T	.	.	.	.	.	.	.	T	T	T		S	S																	.
Template Predicted Secondary structure									.	.																								.	.	.	.	.	.	.																							.
Template SS confidence
		259	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.														.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	.	.	.	.	.	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	N	T	A
Query Conservation																																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		K	D	A	I	L	A	A	A	D	K	W	L	T	G	L	.	A	E	W	H	V	P	A	A	G	M	F	L	W	I	K	V	K	G	I	N	D	V	K	E	L	I	E	E	K	A	V	K	M	G	V	L	M	L	P	G	N	A	F	Y	V	D	S	S	A	P	S	P	Y	L	R	A	S	F	S	S	A	S	P	E
Template Known Secondary structure														B	T	T	.							S	B	S	S							T	T		S		S						T					T	T						G	G	G	G	S	S	S	T	T	S										S	S
Template Predicted Secondary structure																	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	D	V	A	F	Q	V	L	A	Q	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions