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Job DescriptionP04693
Confidence100.00%DateThu Jan 5 10:58:18 GMT 2012
Rank32Aligned Residues364
% Identity16%Templatec3b46B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ..... ...30.........40.........50.........60.........70........
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Query Sequence  KVDAYAGDPILTLMERFK. . . EDPRS. . DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHA
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Template Sequence  YFTSNTAKDVWSLTNEAAAKAANNNQGRELINLGQG. . . . . FFSYSPPQFAIKEAQK. ALDIPMVNQYSPTRGRPSLINS
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S

TT

TTS





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.TTSGGGGS


TT

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   25....30.........40.........50.........60 .........70...... ...80.........90........
 
   7980.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  IAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDE. . . . .
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Template Sequence  LIKLYSPIYNTELKAENVTV. . TTGANEGILSCLMGL. . LNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQ
Template Known Secondary structure  TTS


GGG..S..

TT
S

TTTT


TTTTT
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   101........110.........120 .........130..... ....140.........150.........160.........170......
 
   154.....160.........170.........180.........190.........200.........210.........220........
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Query Sequence  . . . . . ATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYA
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Template Sequence  RNTRGEEWTIDFEQFEKAITSKTK. . . AVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS. . FTR
Template Known Secondary structure  S
B
GGGS
T

TT...SS
TTT




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TTTT
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   177..180.........190.........200 .........210.........220.........230.........240........ .250.
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  IRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASW
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Template Sequence  IATLSPEIGQLTLTVGSAGSFAATGWRIGWVLSLN. . . . . . AELLSYAAKAHTRICFASPSPLQEACANSIND. . . . ALK
Template Known Secondary structure  GGGS
TT



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TTS


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   252.......260.........270.........280...... ...290.........300.........310........ .320.
 
   309310.........320.........330.........340.........350..... ....360........
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Query Sequence  LAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS. . . . . . . . . . . . . . . . . . . . AAQVDRLREEFGV
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Template Sequence  IGYFEKMRQEYINKFKIFTSIFDELG. . . . LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGV
Template Known Secondary structure  TT....



SBSS
TTS


TT



GGGTSS

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   323......330.........340........ .350.........360.........370.........380.........390........
 
   369370... ......380.........390.......
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Query Sequence  YLIAS. . . . . . . . . . . . . . . GRMCVAGLNTANVQRVAKAFAAVM
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Template Sequence  VAIPPTEFYIKEHEKAAENLLRFAVC. KDDAYLENAVERLKLLK
Template Known Secondary structure 
B
GGGGS
GGGGGGGTT

.S
GGGG
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   399400.........410.........420.... .....430.........440.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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