Job Description P04693 Confidence 69.28% Date Thu Jan 5 10:58:18 GMT 2012 Rank 304 Aligned Residues 63 % Identity 13% Template c2wcsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde) Resolution 2.80 Å

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		159	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.														.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	N	D	L	L	A	T	L	.	.	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G
Query Conservation											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	W	G	I	M	E	D	L	D	Y	I	Q	N	L	G	I	N	A	I	Y	F	T	P	I	F	Q	S	A	S	N	H	R	Y	H	T	H	D	Y	Y	Q	V	D	P	M	L	G	G	N	E	A	F	K	E	L	L	D	A	A	H	Q	R	N	I	K	V	V	L	D	G	V	F	N	H	S	S	R	G
Template Known Secondary structure									T								T							S						S	T	T		T	T	S									G	G	G	T															T	T										S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions