 |
Job Description | P04693 | Confidence | 55.49% | Date | Thu Jan 5 10:58:18 GMT 2012 |
Rank | 343 | Aligned Residues | 143 |
% Identity | 10% | Template | c2pqmA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:cysteine synthase; |
PDBTitle: crystal structure of cysteine synthase (oass) from entamoeba2 histolytica at 1.86 a resolution
|
Resolution | 1.86 Å |
|
 |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | L | Y | L | P | M | E | G | L | N | C | Y | R | H | A | I | A | P | L | L | F | G | A | D | H | P | V | L | K | Q | Q | R | V | A | T | I | Q | T | L | G | G | S | G | A | L | K | V | G | A | D | F | L | K | R | Y | F | P | E | S | G | V | W | V | S | D | P | T | W | E | N | H | V | A | I | F | A | G | A | G |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   | . |   |
|
|
|
|   |
|   |
|
|
|   |   |
| . |   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
K | L | E | Y | F | N | P | M | S | S | V | K | D | R | V | G | F | N | I | V | Y | Q | A | I | K | D | G | R | L | K | P | G | M | E | I | I | E | . |
S | T | S | G | N | T | G | I | A | L | C | Q | A | G | . |
A | V | F | G | Y | R | V | N | I | A | M | P | S | T | M | S | V | E | R | Q | M | I | M | K | A | F | G |
Template Known Secondary structure |   |
 |  | G | G | G | S | T | T | S | B | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| T | T |
|  |  |  |  | . |  |
| S | S |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T |
|
|  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | E | V | S | T | Y | P | W | Y | D | E | A | T | N | G | V | R | F | N | D | L | L | A | T | L | K | T | L | P | A | R | S | I | V | L | L | H | P | C | C | H | N | P | T | G | A | D | L | T | N | D | Q | W | D | A | V | I | E | I | L | K | A | R | E | L | I | P | F | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|
|   |
Template Sequence |   |
A | E | L | I | L | T | E | . |
. |
G | K | K | G | M | P | G | A | I | E | E | V | N | K | M | I | K | E | N | P | G | K | . |
. |
Y | F | V | A | N | Q | F | G | N | P | D | N | T | A | A | H | H | Y | T | A | N | E | I | W | E | D | T | D | G | E | V | D | I | V | V | S |
Template Known Secondary structure |   |
|  |  |  |  |  |
| . | . | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | . | . |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | |
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|