Job Description P04693 Confidence 99.96% Date Thu Jan 5 10:58:18 GMT 2012 Rank 103 Aligned Residues 341 % Identity 12% Template c2huuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		A	G	D	P	I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	.	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D
Query Conservation																																																																	.
Alig confidence							.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.																.													.	.	.	.
Template Conservation							.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.																													.	.	.	.
Template Sequence		P	P	A	V	L	.	.	.	.	.	.	R	E	P	L	V	T	P	N	K	L	L	M	G	P	G	.	.	.	.	.	.	.	P	S	N	A	P	Q	R	V	L	D	A	.	.	.	.	M	S	R	P	I	L	G	H	L	H	P	E	T	L	K	I	M	D	D	I	K	E	G	V	R	Y	L	F	.	.	.	.
Template Known Secondary structure				G	G	G	.	.	.	.	.	.	G	S											S	S	S	.	.	.	.	.	.	.												.	.	.	.	T	T	S					T	T	S																			.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.																.	.	.	.	.	.	.												.	.	.	.																													.	.	.	.
Template SS confidence
		7	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L
Query Conservation
Alig confidence		.	.											.																.	.
Template Conservation		.	.											.																.	.
Template Sequence		.	.	Q	T	N	N	I	A	T	F	C	L	.	S	A	S	G	H	G	G	M	E	A	T	L	C	N	L	.	.	L	E	D	G	D	V	I	L	I	G	H	T	G	H	W	G	D	R	S	A	D	M	A	T	R	Y	G	A	D	V	R	V	V	K	S	K	V	G	Q	S	L	S	L	D	E	I	R	D	A	L
Template Known Secondary structure		.	.	T				S						.	S	S														.	.			T	T								S	S													T	T										T	T
Template Predicted Secondary structure		.	.											.																.	.
Template SS confidence
				66	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K
Query Conservation
Alig confidence								.	.																	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation								.	.																	.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		L	I	H	K	P	S	.	.	V	L	F	L	T	Q	G	D	S	S	T	G	V	L	Q	G	.	.	.	L	E	G	V	G	A	L	C	H	Q	H	N	C	L	L	I	V	D	T	V	A	S	L	G	G	A	P	M	F	M	.	.	.	.	.	.	.	.	.	D	R	W	E	I	D	A	M	Y	T	G	S	Q	V
Template Known Secondary structure							S	.	.						S			T	T	T	T					.	.	.		T	T								T	T								T	T	T	B	T	T	B				T	.	.	.	.	.	.	.	.	.	T	T	T	T		S
Template Predicted Secondary structure								.	.																	.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation								.	.																																																																	.	.	.	.	.
Template Sequence		L	G	A	P	P	G	.	.	I	T	P	V	S	F	S	H	R	A	V	E	R	Y	K	R	R	N	T	K	V	K	V	Y	Y	W	D	M	S	L	V	G	D	Y	W	G	C	F	G	R	P	R	I	Y	H	H	T	I	S	S	T	L	L	Y	G	L	R	E	A	I	A	M	A	C	.	.	.	.	.	E	E	G
Template Known Secondary structure						S	S	.	.																T		S	S			S		G	G	G									T	T		S	S	S					S																				.	.	.	.	.
Template Predicted Secondary structure								.	.																																																																	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	A	.	.	.	.	.	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V
Query Conservation																																															.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																												.																			.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		L	P	A	L	I	A	R	H	E	D	C	A	K	R	L	Y	R	G	L	Q	D	A	G	F	E	L	.	Y	A	D	P	K	D	R	L	S	T	V	T	T	I	K	V	P	Q	G	V	D	W	L	K	A	A	Q	Y	A	M	K	T	Y	L	V	E	I	S	G	G	L	G	P	T	A	G	Q	V	F	R	I	G	L
Template Known Secondary structure																							T	T			B	.	S	S		G	G	G	B		T	T								T	T																			B				G	G	G	T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
				379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		M	G	Q	N	A	T	T	E	R	V	D	R	V	L	Q	V	F	Q	E	A	V
Template Known Secondary structure			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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