Job Description P04693 Confidence 99.91% Date Thu Jan 5 10:58:18 GMT 2012 Rank 160 Aligned Residues 316 % Identity 13% Template c2fyfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	.	.	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R
Query Conservation																																			.	.
Alig confidence																																			.	.												.	.	.	.	.	.																											.	.
Template Conservation																																																.	.	.	.	.	.																											.	.
Template Sequence		S	G	P	S	K	V	R	L	E	Q	L	Q	T	L	T	T	T	A	A	A	L	F	G	T	S	H	R	Q	A	P	V	K	N	L	V	G	R	V	R	S	G	L	A	E	L	F	.	.	.	.	.	.	S	L	P	D	G	Y	E	V	I	L	G	N	G	G	A	T	A	F	W	D	A	A	A	F	G	L	.	.
Template Known Secondary structure		S	S	S									G	G	G	G	T	T	T	G	G	G	T	T	S		T	T	S																		T	.	.	.	.	.	.	T			T	T								T													T	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.																											.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		I	D	K	R	S	L	H	L	T	Y	G	E	F	S	A	K	F	A	S	A	V	S	K	N	P	F	V	G	E	P	I	I	I	T	S	D	P	G	S	A	P	E	P	.	.	.	.	.	.	.	.	Q	T	D	P	S	V	D	V	I	A	W	A	H	N	E	T	S	T	G	V	A	V	A	V	R	R	.	.	.
Template Known Secondary structure			S	S								S														T	T	S										T	T						.	.	.	.	.	.	.	.				T	T		S						S			T	T	T	T								.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																		.																										.
Template Conservation		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	P	E	G	S	D	A	L	V	V	I	D	A	T	S	G	A	G	G	L	P	V	.	.	.	.	.	.	.	.	.	.	.	D	I	A	E	T	D	A	Y	Y	F	A	P	Q	K	N	F	A	.	S	D	G	G	L	W	L	A	I	M	S	P	A	A	L	S	R	I	E	A	I	A	A	T	G	R
Template Known Secondary structure		.	.	.	.		T	T										T	T	T	T	T	T	S			.	.	.	.	.	.	.	.	.	.	.		G	G	G		S						T	T	S	T	T		.	S		S	S																				T	T
Template Predicted Secondary structure		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
						165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
															277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																															.	.	.
Template Conservation																																							.	.	.	.																															.	.	.
Template Sequence		W	V	P	D	F	L	S	L	P	I	A	V	E	N	S	L	K	N	Q	T	Y	N	T	P	A	I	A	T	L	A	L	L	A	E	Q	I	D	.	.	.	.	W	L	V	G	N	G	G	L	D	W	A	V	K	R	T	A	D	S	S	Q	R	L	Y	S	W	A	Q	E	R	P	.	.	.	Y	T	T	P	F	V
Template Known Secondary structure					G	G	G										T	T	T			S	S																.	.	.	.					T	T	S																						S	T	.	.	.	T				S
Template Predicted Secondary structure																																							.	.	.	.																															.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.
		344	.	.	.									.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Query SS confidence						.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Query Sequence		N	Q	R	G	.	.	.	.	.	.	.	.	M	F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Query Conservation						.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Alig confidence						.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		T	D	P	G	L	R	S	Q	V	V	G	T	I	D	F	V	D	D	V	D	A	G	T	V	A	K	I	L	R	A	N	G	I	V	D	T	E	P	Y	R	K	L	G	R	N	Q	L	R	V	A	M	F	P	A	V	E	P	D	D	V	S	A	L	T	E	C	V	D	W	V	V
Template Known Secondary structure			S	G	G	G	B		S	S								T	T	S												T	T		B			S			T	T	T			S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions