Job Description P04693 Confidence 99.92% Date Thu Jan 5 10:58:18 GMT 2012 Rank 153 Aligned Residues 337 % Identity 13% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L
Query Conservation
Alig confidence																		.	.														.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																		.	.														.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	.	.	P	K	V	L	A	R	V	R	E	T	L	E	R	.	.	G	L	T	F	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	.	.	.	.	.	.	.	.	.	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T
Template Known Secondary structure				S	S	G	G	G	T	T		T	T		B	T		.	.													T	.	.		S			S	S																	.	.	.	.	.	.	.	.	.	T	T								S	S
Template Predicted Secondary structure																		.	.														.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.													.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	.	V	A	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	.	.	.	.	.	.	.	.	.	.	.	.	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I
Query Conservation																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	A	L	R	L	A	R	G	Y	T	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	E	I	A
Template Known Secondary structure																					T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T						T	T													G	G	G
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R
Query Conservation
Alig confidence																																																.	.	.	.																.	.	.								.
Template Conservation																																																.	.	.	.																.	.	.								.
Template Sequence		A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	R	L	A	.	.	.	.	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	.	.	.	T	L	G	K	I	L	G	.	G	G	L	P
Template Known Secondary structure							S	S	B		T	T	S		B													G	G	G	G	T								T	T	T	T	T	T	S	S	.	.	.	.	T	T							T				S			.	.	.				G	G	G	G	.	T	T	S	S
Template Predicted Secondary structure																																																.	.	.	.																.	.	.								.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.		270	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P
Query Conservation
Alig confidence																	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	.	.	.	.	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	L	.	.	.	.	.	.	.	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K
Template Known Secondary structure													T	T	B	T	.	.	.	.	T	T	S	S	B					T	T		S															.	.	.	.	.	.	.					T
Template Predicted Secondary structure																	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.																		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.						.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.						.
Query Sequence		E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	G	R	M	C	V	.	A	G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.						.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.						.
Template Conservation
Template Sequence		E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	G	I	Y	W	P	P	S	N	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K
Template Known Secondary structure			T	T									T	T						S	S	S	S				S					T	T	S														T	T	T					S	S	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		396	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		423	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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