Job Description P04693 Confidence 99.90% Date Thu Jan 5 10:58:18 GMT 2012 Rank 172 Aligned Residues 295 % Identity 12% Template c1i41J_ PDB info PDB header:lyase Chain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa Resolution 3.20 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		E	A	E	A	R	L	N	A	Q	P	H	G	A	S	L	Y	L	P	M	E	G	.	.	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D	H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D
Query Conservation																							.	.
Alig confidence																							.	.																.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	T	V	V	L	E	E	K	I	S	A	L	E	G	A	E	.	.	.	.	.	.	.	.	.	.	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	.	.	V	P	A	G	G	H	I	V	T	T	T
Template Known Secondary structure									T	T	S	S					B	G	G	G																	T		S	.	.	.	.	.	.	.	.	.	.						S	S													.	.	S		T	T							S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160
		129	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		P	T	W	E	N	H	V	A	I	F	A	G	A	.	.	.	.	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L	A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.									.	.	.	.	.	.	.														.	.																					.	.	.
Template Conservation																											.	.	.	.	.	.	.														.	.																					.	.	.
Template Sequence		D	C	Y	R	K	T	R	I	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	.	.	.	.	.	.	.	P	A	D	V	G	A	L	E	L	A	L	N	Q	.	.	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	.	.	.	I	E	L	V	S	K	L	C	H	E
Template Known Secondary structure		S												T	G	G	G	G	T								.	.	.	.	.	.	.	S	S												.	.	S									S	S		T	T	T						.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.														.	.																					.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S	F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		K	G	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	.	.	.	.	.	.	.	.	.	.	A	L	A	L	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	.	.	.	.	.	.	L	K	L	V	S	E	I	R	N	L	H	H	I	L	G
Template Known Secondary structure		T	T								T	T	T							.	.	.	.	.	.	.	.	.	.	T	T	T	T	T		S						T	T	T	T	T	T		S	S	S										.	.	.	.	.	.															T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q	E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	N	Q	R	G	M
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	N	P	N	A	A	Y	L	I	I	R	G	M	K	T	.	.	.	.	.	.	.	.	.	.	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V
Template Known Secondary structure																	T	T	.	.	.	.	.	.	.	.	.	.																							S	S							T	T	S	T	T	S	T	T									S				S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.											310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.																																.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		F	S	Y	T	G	L	S	A	A	Q	V	D	R	L	R	E	E	.	.	.	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	G	L	.	.	N	T	A	N	V	Q	R	V	A	K	A
Query Conservation																			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.			.	.
Template Conservation																																																																		.
Template Sequence		S	F	E	V	D	G	D	L	L	T	T	A	K	F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	.	G	V	E	D	F	D	D	L	K	A	D	I	L	Q	A
Template Known Secondary structure						S	S													S	S	S			S	S				S	S	S												T	T	S							T	T	T			S	S							.		S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		393	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	S	I
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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